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NM_000083.3(CLCN1):c.442T>C (p.Trp148Arg) AND Tip-toe gait

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
Dec 27, 2022
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV003319242.2

Allele description [Variation Report for NM_000083.3(CLCN1):c.442T>C (p.Trp148Arg)]

NM_000083.3(CLCN1):c.442T>C (p.Trp148Arg)

Gene:
CLCN1:chloride voltage-gated channel 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
7q34
Genomic location:
Preferred name:
NM_000083.3(CLCN1):c.442T>C (p.Trp148Arg)
HGVS:
  • NC_000007.14:g.143321373T>C
  • NG_009815.2:g.10248T>C
  • NM_000083.2:c.442T>C
  • NM_000083.3:c.442T>CMANE SELECT
  • NP_000074.3:p.Trp148Arg
  • NC_000007.13:g.143018466T>C
  • NR_046453.2:n.544T>C
Protein change:
W148R
Links:
dbSNP: rs1409574232
NCBI 1000 Genomes Browser:
rs1409574232
Molecular consequence:
  • NM_000083.3:c.442T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NR_046453.2:n.544T>C - non-coding transcript variant - [Sequence Ontology: SO:0001619]

Condition(s)

Name:
Tip-toe gait
Synonyms:
Toe walking
Identifiers:
MedGen: C0427144; Human Phenotype Ontology: HP:0030051

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV004022488Practice for Gait Abnormalities, David Pomarino, Competency Network Toe Walking c/o Practice Pomarino
no assertion criteria provided
Likely pathogenic
(Dec 27, 2022)
germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

NGS-Panel Diagnosis Developed for the Differential Diagnosis of Idiopathic Toe Walking and Its Application for the Investigation of Possible Genetic Causes for the Gait Anomaly.

Pomarino D, Emelina A, Heidrich J, Rostásy K, Schirmer S, Schönfeldt JO, Thren A, Wagner F, Thren JR, Berger N.

Glob Med Genet. 2023 Jun;10(2):63-71. doi: 10.1055/s-0043-57230.

PubMed [citation]
PMID:
37091313
PMCID:
PMC10121371

Details of each submission

From Practice for Gait Abnormalities, David Pomarino, Competency Network Toe Walking c/o Practice Pomarino, SCV004022488.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providedclinical testing PubMed (1)

Description

Myopathy refers to diseases that affect skeletal Muscles. These diseases attack muscle fibers, making muscles weak. Inherited myopathies are often caused by inheriting an abnormal gene mutation from a parent that causes the disease. Symptoms of congenital myopathies usually start at birth or in early childhood, but may not appear until the teen years or even later in adulthood. Congenital myopathies are somewhat unique compared with other inherited myopathies, as weakness typically affects all muscles and is often not progressive. Symptoms are: Muscle weakness, most commonly of upper arms and shoulders and thighs, muscle cramps, stiffness and spasms, fatigue with exertion and lack of energy. Our patients all walk on tiptoe, so they show similar symptoms. When we genetically test them with our toe walking panel, we find that around 90 per cent of them have a genetic variant that explains their toe walking. These can be assigned, for example, to the area of myopathies (such as variants of the COL6A3 gene), the area of hereditary neuropathies (such as variants of the KMT2C gene) or the area of metabolic diseases (such as variants of the PYGM gene). In a smaller group of patients with almost identical symptoms, no abnormality is found in the genes of our panel, but spastic paraplegia can be detected. In another small group of our toe walkers, no abnormalities can be detected in the genes analysed in our toe walking panel, nor do they suffer from spastic paraplegia, as is also the case with healthy children. In contrast to these, however, they show a tiptoe gait. These patients suffer from infantile cerebral palsy, in which toe walking can also be observed.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024