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NM_007078.3(LDB3):c.1475C>A (p.Thr492Lys) AND Long QT syndrome

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Jan 8, 2024
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV003318448.2

Allele description [Variation Report for NM_007078.3(LDB3):c.1475C>A (p.Thr492Lys)]

NM_007078.3(LDB3):c.1475C>A (p.Thr492Lys)

Gene:
LDB3:LIM domain binding 3 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
10q23.2
Genomic location:
Preferred name:
NM_007078.3(LDB3):c.1475C>A (p.Thr492Lys)
HGVS:
  • NC_000010.11:g.86716570C>A
  • NG_008876.1:g.53007C>A
  • NM_001080114.2:c.1145C>A
  • NM_001171610.2:c.1490C>A
  • NM_001368064.1:c.1286C>A
  • NM_001368065.1:c.1286C>A
  • NM_001368066.1:c.1334C>A
  • NM_007078.3:c.1475C>AMANE SELECT
  • NP_001073583.1:p.Thr382Lys
  • NP_001165081.1:p.Thr497Lys
  • NP_001354993.1:p.Thr429Lys
  • NP_001354994.1:p.Thr429Lys
  • NP_001354995.1:p.Thr445Lys
  • NP_009009.1:p.Thr492Lys
  • NP_009009.1:p.Thr492Lys
  • LRG_385t1:c.1475C>A
  • LRG_385:g.53007C>A
  • LRG_385p1:p.Thr492Lys
  • NC_000010.10:g.88476327C>A
  • NM_007078.2:c.1475C>A
Protein change:
T382K
Molecular consequence:
  • NM_001080114.2:c.1145C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001171610.2:c.1490C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001368064.1:c.1286C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001368065.1:c.1286C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001368066.1:c.1334C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_007078.3:c.1475C>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Long QT syndrome (LQTS)
Identifiers:
MONDO: MONDO:0002442; MeSH: D008133; MedGen: C0023976

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV004022046Dept of Medical Biology, Uskudar University
criteria provided, single submitter

(Dept of Medical Biology Variant Classification)
Uncertain significance
(Jan 8, 2024)
paternalresearch

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
Turkishpaternalyes1not providednot providednot providednot providedresearch

Details of each submission

From Dept of Medical Biology, Uskudar University, SCV004022046.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1Turkish1not providednot providedresearchnot provided

Description

Criteria: PM2

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1paternalyesnot providednot providednot provided1not providednot providednot provided

Last Updated: Feb 4, 2024