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NM_000533.5(PLP1):c.98G>T (p.Cys33Phe) AND Pelizaeus-Merzbacher disease

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Sep 16, 2022
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV003136402.1

Allele description [Variation Report for NM_000533.5(PLP1):c.98G>T (p.Cys33Phe)]

NM_000533.5(PLP1):c.98G>T (p.Cys33Phe)

Genes:
RAB9B:RAB9B, member RAS oncogene family [Gene - OMIM - HGNC]
PLP1:proteolipid protein 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
Xq22.2
Genomic location:
Preferred name:
NM_000533.5(PLP1):c.98G>T (p.Cys33Phe)
HGVS:
  • NC_000023.11:g.103785675G>T
  • NG_008863.2:g.14165G>T
  • NG_016452.2:g.51608C>A
  • NM_000533.5:c.98G>TMANE SELECT
  • NM_001128834.3:c.98G>T
  • NM_001305004.1:c.5-72G>T
  • NM_199478.3:c.98G>T
  • NP_000524.3:p.Cys33Phe
  • NP_001122306.1:p.Cys33Phe
  • NP_955772.1:p.Cys33Phe
  • NC_000023.10:g.103040604G>T
Protein change:
C33F
Links:
dbSNP: rs1064794255
NCBI 1000 Genomes Browser:
rs1064794255
Molecular consequence:
  • NM_001305004.1:c.5-72G>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_000533.5:c.98G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001128834.3:c.98G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_199478.3:c.98G>T - missense variant - [Sequence Ontology: SO:0001583]
Observations:
1

Condition(s)

Name:
Pelizaeus-Merzbacher disease
Synonyms:
LEUKODYSTROPHY, HYPOMYELINATING, 1; Pelizaeus Merzbacher brain sclerosis; Sudanophilic leukodystrophy; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0010714; MedGen: C0205711; Orphanet: 702; OMIM: 312080; Human Phenotype Ontology: HP:0003269

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV003807776Laboratorio de Genetica e Diagnostico Molecular, Hospital Israelita Albert Einstein
criteria provided, single submitter

(ACMG Guidelines, 2015)
Uncertain significance
(Sep 16, 2022)
germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyes1not providednot provided1not providedclinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee..

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From Laboratorio de Genetica e Diagnostico Molecular, Hospital Israelita Albert Einstein, SCV003807776.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testing PubMed (1)

Description

ACMG classification criteria: PM2 moderated, PM5 moderated, PP3 supporting

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyes1not providednot provided1not providednot providednot provided

Last Updated: Sep 29, 2024