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NM_001127222.2(CACNA1A):c.4033C>T (p.Arg1345Ter) AND See cases

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Nov 8, 2022
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV003128416.2

Allele description [Variation Report for NM_001127222.2(CACNA1A):c.4033C>T (p.Arg1345Ter)]

NM_001127222.2(CACNA1A):c.4033C>T (p.Arg1345Ter)

Gene:
CACNA1A:calcium voltage-gated channel subunit alpha1 A [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
19p13.13
Genomic location:
Preferred name:
NM_001127222.2(CACNA1A):c.4033C>T (p.Arg1345Ter)
HGVS:
  • NC_000019.10:g.13262790G>A
  • NG_011569.1:g.248671C>T
  • NM_000068.4:c.4045C>T
  • NM_001127221.2:c.4036C>T
  • NM_001127222.2:c.4033C>TMANE SELECT
  • NM_001174080.2:c.4036C>T
  • NM_023035.3:c.4045C>T
  • NP_000059.3:p.Arg1349Ter
  • NP_001120693.1:p.Arg1346Ter
  • NP_001120693.1:p.Arg1346Ter
  • NP_001120694.1:p.Arg1345Ter
  • NP_001167551.1:p.Arg1346Ter
  • NP_075461.2:p.Arg1349Ter
  • LRG_7t1:c.4036C>T
  • LRG_7:g.248671C>T
  • LRG_7p1:p.Arg1346Ter
  • NC_000019.9:g.13373604G>A
  • NM_000068.2:c.4036C>T
  • NM_001127221.1:c.4036C>T
Protein change:
R1345*
Links:
dbSNP: rs1568473233
NCBI 1000 Genomes Browser:
rs1568473233
Molecular consequence:
  • NM_000068.4:c.4045C>T - nonsense - [Sequence Ontology: SO:0001587]
  • NM_001127221.2:c.4036C>T - nonsense - [Sequence Ontology: SO:0001587]
  • NM_001127222.2:c.4033C>T - nonsense - [Sequence Ontology: SO:0001587]
  • NM_001174080.2:c.4036C>T - nonsense - [Sequence Ontology: SO:0001587]
  • NM_023035.3:c.4045C>T - nonsense - [Sequence Ontology: SO:0001587]
Observations:
1

Condition(s)

Name:
See cases [See the Variation display for details]
Identifiers:

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV003804909Institute of Human Genetics, University Hospital Muenster
criteria provided, single submitter

(ACMG Guidelines, 2015)
Pathogenic
(Nov 8, 2022)
unknownclinical testing

PubMed (3)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownyes1not providednot providednot providednot providedclinical testing

Citations

PubMed

A novel de novo pathogenic mutation in the CACNA1A gene.

Fujioka S, Rayaprolu S, Sundal C, Broderick DF, Langley WA, Shoffner J, Hyams LC, Rademakers R, Graff-Radford NR, Tatum W, Ross OA, Wszolek ZK.

Mov Disord. 2012 Oct;27(12):1578-9. doi: 10.1002/mds.25198. Epub 2012 Oct 4. No abstract available.

PubMed [citation]
PMID:
23038654
PMCID:
PMC3477248

Identification of Two de novo Variants of CACNA1A in Pediatric Chinese Patients With Paroxysmal Tonic Upgaze.

Zhang LP, Jia Y, Wang YP.

Front Pediatr. 2021;9:722105. doi: 10.3389/fped.2021.722105.

PubMed [citation]
PMID:
34631621
PMCID:
PMC8500051
See all PubMed Citations (3)

Details of each submission

From Institute of Human Genetics, University Hospital Muenster, SCV003804909.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testing PubMed (3)

Description

ACMG categories: PVS1,PM2,PP3,PP5

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownyesnot providedbloodnot provided1not providednot providednot provided

Last Updated: Oct 20, 2024