NM_000243.3(MEFV):c.985C>T (p.Arg329Cys) AND Acute febrile neutrophilic dermatosis

Germline classification:: Benign (1 submission)
Last evaluated:: Feb 8, 2023
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV003125954.1

Allele description [Variation Report for NM_000243.3(MEFV):c.985C>T (p.Arg329Cys)]

NM_000243.3(MEFV):c.985C>T (p.Arg329Cys)

Gene:

MEFV:MEFV innate immunity regulator, pyrin [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

16p13.3

Genomic location:

Preferred name:

NM_000243.3(MEFV):c.985C>T (p.Arg329Cys)

HGVS:

NC_000016.10:g.3249706G>A
NG_007871.1:g.11922C>T
NM_000243.3:c.985C>TMANE SELECT
NM_001198536.2:c.352C>T
NP_000234.1:p.Arg329Cys
NP_001185465.2:p.Arg118Cys
LRG_190:g.11922C>T
NC_000016.9:g.3299706G>A

Protein change:

R118C

Links:

dbSNP: rs757216434

NCBI 1000 Genomes Browser:

rs757216434

Molecular consequence:

NM_000243.3:c.985C>T - missense variant - [Sequence Ontology: SO:0001583]
NM_001198536.2:c.352C>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:: Acute febrile neutrophilic dermatosis (AFND)
Synonyms:: Sweet Syndrome; Gomm Button disease
Identifiers:: MONDO: MONDO:0011959; MedGen: C0085077; Orphanet: 3243; OMIM: 608068

Recent activity

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synaptogyrin-1 [Rattus norvegicus]
synaptogyrin-1 [Rattus norvegicus]
gi|9507167|ref|NP_062039.1|

Protein
PREDICTED: Cyclopterus lumpus patatin-like phospholipase domain containing 4 (pn...
PREDICTED: Cyclopterus lumpus patatin-like phospholipase domain containing 4 (pnpla4), transcript variant X1, mRNA
gi|1842303911|ref|XM_034554906.1|

Nucleotide

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV003802229	Genome-Nilou Lab	criteria provided, single submitter (ACMG Guidelines, 2015)	Benign (Feb 8, 2023)	germline	clinical testing	PubMed (1) [See all records that cite this PMID]

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV003802229

Genome-Nilou Lab

criteria provided, single submitter

(ACMG Guidelines, 2015)

Benign
(Feb 8, 2023)

germline

clinical testing

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee..

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]

PMID:: 25741868
PMCID:: PMC4544753

Details of each submission

From Genome-Nilou Lab, SCV003802229.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	PubMed (1)

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Sep 29, 2024

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