NM_004281.4(BAG3):c.1314T>C (p.Ala438=) AND multiple conditions

This record was updated by the submitter. Please see the current version.

Germline classification:: Likely benign (1 submission)
Last evaluated:: Jan 19, 2024
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV003094961.2

Allele description

NM_004281.4(BAG3):c.1314T>C (p.Ala438=)

Gene:

BAG3:BAG cochaperone 3 [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

10q26.11

Genomic location:

Preferred name:

NM_004281.4(BAG3):c.1314T>C (p.Ala438=)

HGVS:

NC_000010.11:g.119676868T>C
NG_016125.1:g.30499T>C
NM_004281.4:c.1314T>CMANE SELECT
NP_004272.2:p.Ala438=
NP_004272.2:p.Ala438=
LRG_742t1:c.1314T>C
LRG_742:g.30499T>C
LRG_742p1:p.Ala438=
NC_000010.10:g.121436380T>C
NM_004281.3:c.1314T>C

Molecular consequence:

NM_004281.4:c.1314T>C - synonymous variant - [Sequence Ontology: SO:0001819]

Condition(s)

Name:: Myofibrillar myopathy 6
Synonyms:: Myofibrillar myopathy, BAG3-related
Identifiers:: MONDO: MONDO:0013061; MedGen: C2751831; Orphanet: 199340; OMIM: 612954

Name:: Dilated cardiomyopathy 1HH (CMD1HH)
Identifiers:: MONDO: MONDO:0013479; MedGen: C3151293; Orphanet: 154; OMIM: 613881

Recent activity

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PREDICTED: Homo sapiens phosphatidylserine synthase 2 (PTDSS2), transcript varia...
PREDICTED: Homo sapiens phosphatidylserine synthase 2 (PTDSS2), transcript variant X7, misc_RNA
gi|2462527820|ref|XR_008488464.1|

Nucleotide
Abutilon muelleri (0)
Protein
protein tyrosine phosphatase non-receptor type 12, partial [Apteryx owenii]
protein tyrosine phosphatase non-receptor type 12, partial [Apteryx owenii]
gi|405133639|gb|AFS17627.1|

Protein
Abutilon halophilum AND 1[s_discriminator] (0)
dbGaP
Campylobacter coli strain FSIS12431603, whole genome shotgun sequencing project
Campylobacter coli strain FSIS12431603, whole genome shotgun sequencing project
gi|2814135364|gb|ABVURQ000000000.1| Q010000000

Nucleotide

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV003463031	Invitae	criteria provided, single submitter (Invitae Variant Classification Sherloc (09022015))	Likely benign (Jan 19, 2024)	germline	clinical testing	PubMed (1) [See all records that cite this PMID]

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV003463031

Invitae

criteria provided, single submitter

(Invitae Variant Classification Sherloc (09022015))

Likely benign
(Jan 19, 2024)

germline

clinical testing

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Citations

PubMed

Sherloc: a comprehensive refinement of the ACMG-AMP variant classification criteria.

Nykamp K, Anderson M, Powers M, Garcia J, Herrera B, Ho YY, Kobayashi Y, Patil N, Thusberg J, Westbrook M; Invitae Clinical Genomics Group., Topper S.

Genet Med. 2017 Oct;19(10):1105-1117. doi: 10.1038/gim.2017.37. Epub 2017 May 11. Erratum in: Genet Med. 2020 Jan;22(1):240. doi: 10.1038/s41436-019-0624-9.

PubMed [citation]

PMID:: 28492532
PMCID:: PMC5632818

Details of each submission

From Invitae, SCV003463031.2

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	PubMed (1)

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: May 1, 2024

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