NM_003322.6(TULP1):c.1330G>A (p.Asp444Asn) AND Inborn genetic diseases

Germline classification:: Uncertain significance (1 submission)
Last evaluated:: Jun 29, 2022
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV002557917.2

Allele description [Variation Report for NM_003322.6(TULP1):c.1330G>A (p.Asp444Asn)]

NM_003322.6(TULP1):c.1330G>A (p.Asp444Asn)

Gene:

TULP1:TUB like protein 1 [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

6p21.31

Genomic location:

Preferred name:

NM_003322.6(TULP1):c.1330G>A (p.Asp444Asn)

HGVS:

NC_000006.12:g.35500146C>T
NG_009077.1:g.17725G>A
NM_001289395.2:c.1171G>A
NM_003322.6:c.1330G>AMANE SELECT
NP_001276324.1:p.Asp391Asn
NP_003313.3:p.Asp444Asn
NC_000006.11:g.35467923C>T
NC_000006.11:g.35467923C>T
NM_003322.3:c.1330G>A

Protein change:

D391N

Links:

dbSNP: rs138400030

NCBI 1000 Genomes Browser:

rs138400030

Molecular consequence:

NM_001289395.2:c.1171G>A - missense variant - [Sequence Ontology: SO:0001583]
NM_003322.6:c.1330G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:: Inborn genetic diseases
Identifiers:: MeSH: D030342; MedGen: C0950123

Recent activity

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Mus musculus kynurenine aminotransferase 3 (Kyat3), transcript variant 1, mRNA
Mus musculus kynurenine aminotransferase 3 (Kyat3), transcript variant 1, mRNA
gi|649572288|ref|NM_001293560.1|

Nucleotide
leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 [Cucumis ...
leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 [Cucumis sativus]
gi|449451567|ref|XP_004143533.1|

Protein

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV003743274	Ambry Genetics	criteria provided, single submitter (Ambry Variant Classification Scheme 2023)	Uncertain significance (Jun 29, 2022)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV003743274

Ambry Genetics

criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)

Uncertain significance
(Jun 29, 2022)

germline

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From Ambry Genetics, SCV003743274.2

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

Description

The c.1330G>A (p.D444N) alteration is located in exon 14 (coding exon 14) of the TULP1 gene. This alteration results from a G to A substitution at nucleotide position 1330, causing the aspartic acid (D) at amino acid position 444 to be replaced by an asparagine (N). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Sep 29, 2024

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