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NM_001042492.3(NF1):c.5768C>T (p.Thr1923Met) AND not provided

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Jul 14, 2022
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV002510804.1

Allele description [Variation Report for NM_001042492.3(NF1):c.5768C>T (p.Thr1923Met)]

NM_001042492.3(NF1):c.5768C>T (p.Thr1923Met)

Gene:
NF1:neurofibromin 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
17q11.2
Genomic location:
Preferred name:
NM_001042492.3(NF1):c.5768C>T (p.Thr1923Met)
HGVS:
  • NC_000017.11:g.31330454C>T
  • NG_009018.1:g.240478C>T
  • NM_000267.3:c.5705C>T
  • NM_001042492.3:c.5768C>TMANE SELECT
  • NP_000258.1:p.Thr1902Met
  • NP_001035957.1:p.Thr1923Met
  • NP_001035957.1:p.Thr1923Met
  • LRG_214t1:c.5705C>T
  • LRG_214t2:c.5768C>T
  • LRG_214:g.240478C>T
  • LRG_214p1:p.Thr1902Met
  • LRG_214p2:p.Thr1923Met
  • NC_000017.10:g.29657472C>T
  • NM_001042492.2:c.5768C>T
  • NM_001042492.3:c.5768C>T
  • p.T1923M
Protein change:
T1902M
Links:
dbSNP: rs786203824
NCBI 1000 Genomes Browser:
rs786203824
Molecular consequence:
  • NM_000267.3:c.5705C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001042492.3:c.5768C>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV002820814GeneDx
criteria provided, single submitter

(GeneDx Variant Classification Process June 2021)
Uncertain significance
(Jul 14, 2022)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From GeneDx, SCV002820814.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

In silico analysis supports that this missense variant has a deleterious effect on protein structure/function; Absent from cases but present in controls in a breast cancer case-control study (Momozawa et al., 2018); This variant is associated with the following publications: (PMID: 30287823)

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024