NM_014000.3(VCL):c.2918T>C (p.Leu973Ser) AND Cardiovascular phenotype

Germline classification:: Uncertain significance (1 submission)
Last evaluated:: Feb 4, 2019
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV002439904.2

Allele description [Variation Report for NM_014000.3(VCL):c.2918T>C (p.Leu973Ser)]

NM_014000.3(VCL):c.2918T>C (p.Leu973Ser)

Gene:

VCL:vinculin [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

10q22.2

Genomic location:

Preferred name:

NM_014000.3(VCL):c.2918T>C (p.Leu973Ser)

HGVS:

NC_000010.11:g.74112081T>C
NG_008868.1:g.118968T>C
NM_003373.4:c.2746-2103T>C
NM_014000.3:c.2918T>CMANE SELECT
NP_054706.1:p.Leu973Ser
NP_054706.1:p.Leu973Ser
LRG_383t1:c.2918T>C
LRG_383:g.118968T>C
LRG_383p1:p.Leu973Ser
NC_000010.10:g.75871839T>C
NM_014000.2:c.2918T>C

Protein change:

L973S

Molecular consequence:

NM_003373.4:c.2746-2103T>C - intron variant - [Sequence Ontology: SO:0001627]
NM_014000.3:c.2918T>C - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:: Cardiovascular phenotype
Identifiers:: MedGen: CN230736

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV002751008	Ambry Genetics	criteria provided, single submitter (Ambry Variant Classification Scheme 2023)	Uncertain significance (Feb 4, 2019)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV002751008

Ambry Genetics

criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)

Uncertain significance
(Feb 4, 2019)

germline

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From Ambry Genetics, SCV002751008.2

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

Description

The p.L973S variant (also known as c.2918T>C), located in coding exon 19 of the VCL gene, results from a T to C substitution at nucleotide position 2918. The leucine at codon 973 is replaced by serine, an amino acid with dissimilar properties. This amino acid position is highly conserved in available vertebrate species. In addition, this alteration is predicted to be deleterious by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: May 1, 2024

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