U.S. flag

An official website of the United States government

NM_000020.3(ACVRL1):c.259C>G (p.His87Asp) AND Cardiovascular phenotype

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Dec 29, 2015
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV002425040.2

Allele description [Variation Report for NM_000020.3(ACVRL1):c.259C>G (p.His87Asp)]

NM_000020.3(ACVRL1):c.259C>G (p.His87Asp)

Gene:
ACVRL1:activin A receptor like type 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
12q13.13
Genomic location:
Preferred name:
NM_000020.3(ACVRL1):c.259C>G (p.His87Asp)
HGVS:
  • NC_000012.12:g.51913296C>G
  • NG_009549.1:g.10879C>G
  • NM_000020.3:c.259C>GMANE SELECT
  • NM_001077401.2:c.259C>G
  • NP_000011.2:p.His87Asp
  • NP_001070869.1:p.His87Asp
  • LRG_543t1:c.259C>G
  • LRG_543:g.10879C>G
  • NC_000012.11:g.52307080C>G
  • NM_000020.2:c.259C>G
Protein change:
H87D
Links:
dbSNP: rs1430932447
NCBI 1000 Genomes Browser:
rs1430932447
Molecular consequence:
  • NM_000020.3:c.259C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001077401.2:c.259C>G - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Cardiovascular phenotype
Identifiers:
MedGen: CN230736

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV002743009Ambry Genetics
criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)
Uncertain significance
(Dec 29, 2015)
germlineclinical testing

PubMed (3)
[See all records that cite these PMIDs]

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Multiple sequence variants in hereditary hemorrhagic telangiectasia cases: illustration of complexity in molecular diagnostic interpretation.

McDonald J, Gedge F, Burdette A, Carlisle J, Bukjiok CJ, Fox M, Bayrak-Toydemir P.

J Mol Diagn. 2009 Nov;11(6):569-75. doi: 10.2353/jmoldx.2009.080148. Epub 2009 Sep 18.

PubMed [citation]
PMID:
19767588
PMCID:
PMC2765756

Bioinformatic analysis of pathogenic missense mutations of activin receptor like kinase 1 ectodomain.

Scotti C, Olivieri C, Boeri L, Canzonieri C, Ornati F, Buscarini E, Pagella F, Danesino C.

PLoS One. 2011;6(10):e26431. doi: 10.1371/journal.pone.0026431. Epub 2011 Oct 18.

PubMed [citation]
PMID:
22028876
PMCID:
PMC3196573
See all PubMed Citations (3)

Details of each submission

From Ambry Genetics, SCV002743009.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (3)

Description

The p.H87D variant (also known as c.259C>G) is located in coding exon 2 of the ACVRL1 gene. This alteration results from a C to G substitution at nucleotide position 259. The histidine at codon 87 is replaced by aspartic acid, an amino acid with dissimilar properties. This variant was reported in an 11 year old proband affected with frequent epixstasis and one equivocal telangiectasia, whose father is affected with hereditary hemorrhagic telangiectasia (HHT) and has a younger brother with frequent nosebleeds since age 1. The proband also carried the ENG p.R571H alteration, which has been reported in one case of early onset juvenile polyposis syndrome by Sweet et al, 2005. Both ACVRL1 p.H87D and ENG p.R571H were presumably inherited from the affected father (who was not available for testing) as the patient's unaffected mother carried neither of these changes. The proband's younger brother was negative for ACVRL1 p.H87D and positive for ENG pR571H. In addition, the ACVRL1 p.H87D variant was observed in the proband's reportedly affected paternal grandmother, and the ENG p.R571H was observed in the unaffected paternal grandfather. Thus, the segregation of ACVRL1 p.H87D with HHT is suggestive but not entirely conclusive in this family (McDonald J et al. J Mol Diagn. 2009;11(6):569-575). This variant was not reported in population-based cohorts in the following databases: Database of Single Nucleotide Polymorphisms (dbSNP), NHLBI Exome Sequencing Project (ESP) and 1000 Genomes Project. Based on available vertebrate protein sequence alignment, this amino acid position is well conserved in mammals. In addition, the in silico prediction for this alteration is inconclusive. Based on available evidence to date, the clinical significance of this variant remains unclear.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024