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NM_000051.4(ATM):c.7891G>C (p.Ala2631Pro) AND Hereditary cancer-predisposing syndrome

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Mar 23, 2021
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV002416589.9

Allele description [Variation Report for NM_000051.4(ATM):c.7891G>C (p.Ala2631Pro)]

NM_000051.4(ATM):c.7891G>C (p.Ala2631Pro)

Genes:
ATM:ATM serine/threonine kinase [Gene - OMIM - HGNC]
C11orf65:chromosome 11 open reading frame 65 [Gene - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
11q22.3
Genomic location:
Preferred name:
NM_000051.4(ATM):c.7891G>C (p.Ala2631Pro)
HGVS:
  • NC_000011.10:g.108332864G>C
  • NG_009830.1:g.115033G>C
  • NG_054724.1:g.141969C>G
  • NM_000051.4:c.7891G>CMANE SELECT
  • NM_001330368.2:c.641-23793C>G
  • NM_001351110.2:c.*38+2356C>G
  • NM_001351834.2:c.7891G>C
  • NP_000042.3:p.Ala2631Pro
  • NP_000042.3:p.Ala2631Pro
  • NP_001338763.1:p.Ala2631Pro
  • LRG_135t1:c.7891G>C
  • LRG_135:g.115033G>C
  • LRG_135p1:p.Ala2631Pro
  • NC_000011.9:g.108203591G>C
  • NM_000051.3:c.7891G>C
Protein change:
A2631P
Molecular consequence:
  • NM_001330368.2:c.641-23793C>G - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001351110.2:c.*38+2356C>G - intron variant - [Sequence Ontology: SO:0001627]
  • NM_000051.4:c.7891G>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001351834.2:c.7891G>C - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Hereditary cancer-predisposing syndrome
Synonyms:
Neoplastic Syndromes, Hereditary; Tumor predisposition; Cancer predisposition; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0015356; MeSH: D009386; MedGen: C0027672

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV002681071Ambry Genetics
criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)		Uncertain significance
(Mar 23, 2021) 		germlineclinical testing

Citation Link

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Ambry Genetics, SCV002681071.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

The p.A2631P variant (also known as c.7891G>C), located in coding exon 52 of the ATM gene, results from a G to C substitution at nucleotide position 7891. The alanine at codon 2631 is replaced by proline, an amino acid with highly similar properties. This amino acid position is highly conserved in available vertebrate species. In addition, this alteration is predicted to be deleterious by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Nov 10, 2024