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NM_000071.3(CBS):c.15C>T (p.Thr5=) AND Familial thoracic aortic aneurysm and aortic dissection

Germline classification:
Likely benign (1 submission)
Last evaluated:
Jul 6, 2022
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV002404929.9

Allele description [Variation Report for NM_000071.3(CBS):c.15C>T (p.Thr5=)]

NM_000071.3(CBS):c.15C>T (p.Thr5=)

Gene:
CBS:cystathionine beta-synthase [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
21q22.3
Genomic location:
Preferred name:
NM_000071.3(CBS):c.15C>T (p.Thr5=)
HGVS:
  • NC_000021.9:g.43072179G>A
  • NG_008938.1:g.8752C>T
  • NM_000071.3:c.15C>TMANE SELECT
  • NM_001178008.3:c.15C>T
  • NM_001178009.3:c.15C>T
  • NM_001320298.2:c.15C>T
  • NP_000062.1:p.Thr5=
  • NP_001171479.1:p.Thr5=
  • NP_001171480.1:p.Thr5=
  • NP_001307227.1:p.Thr5=
  • LRG_777t1:c.15C>T
  • LRG_777:g.8752C>T
  • NC_000021.8:g.44492289G>A
  • NM_000071.2:c.15C>T
Links:
dbSNP: rs137920248
NCBI 1000 Genomes Browser:
rs137920248
Molecular consequence:
  • NM_000071.3:c.15C>T - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_001178008.3:c.15C>T - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_001178009.3:c.15C>T - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_001320298.2:c.15C>T - synonymous variant - [Sequence Ontology: SO:0001819]

Condition(s)

Name:
Familial thoracic aortic aneurysm and aortic dissection (TAAD)
Synonyms:
Thoracic aortic aneurysm and aortic dissection; Thoracic aortic aneurysms and dissections
Identifiers:
MONDO: MONDO:0019625; MedGen: C4707243; Orphanet: 91387; OMIM: PS607086

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Assertion and evidence details

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Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV002707856Ambry Genetics
criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)		Likely benign
(Jul 6, 2022) 		germlineclinical testing

Citation Link

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Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Ambry Genetics, SCV002707856.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Nov 3, 2024