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NM_024301.5(FKRP):c.1458G>C (p.Pro486=) AND Cardiovascular phenotype

Germline classification:
Likely benign (1 submission)
Last evaluated:
Oct 20, 2019
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV002391351.2

Allele description [Variation Report for NM_024301.5(FKRP):c.1458G>C (p.Pro486=)]

NM_024301.5(FKRP):c.1458G>C (p.Pro486=)

Gene:
FKRP:fukutin related protein [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
19q13.32
Genomic location:
Preferred name:
NM_024301.5(FKRP):c.1458G>C (p.Pro486=)
HGVS:
  • NC_000019.10:g.46756908G>C
  • NG_008898.2:g.15863G>C
  • NM_001039885.3:c.1458G>C
  • NM_024301.5:c.1458G>CMANE SELECT
  • NP_001034974.1:p.Pro486=
  • NP_077277.1:p.Pro486=
  • LRG_761t1:c.1458G>C
  • LRG_761:g.15863G>C
  • LRG_761p1:p.Pro486=
  • NC_000019.9:g.47260165G>C
  • NM_024301.4:c.1458G>C
Links:
dbSNP: rs762008480
NCBI 1000 Genomes Browser:
rs762008480
Molecular consequence:
  • NM_001039885.3:c.1458G>C - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_024301.5:c.1458G>C - synonymous variant - [Sequence Ontology: SO:0001819]

Condition(s)

Name:
Cardiovascular phenotype
Identifiers:
MedGen: CN230736

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Assertion and evidence details

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Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV002701924Ambry Genetics
criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)		Likely benign
(Oct 20, 2019) 		germlineclinical testing

Citation Link

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Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Ambry Genetics, SCV002701924.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024