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NM_001458.5(FLNC):c.6468C>T (p.Leu2156=) AND Cardiovascular phenotype

Germline classification:
Likely benign (1 submission)
Last evaluated:
Sep 12, 2022
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV002361931.2

Allele description [Variation Report for NM_001458.5(FLNC):c.6468C>T (p.Leu2156=)]

NM_001458.5(FLNC):c.6468C>T (p.Leu2156=)

Genes:
FLNC-AS1:FLNC antisense RNA 1 [Gene - HGNC]
FLNC:filamin C [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
7q32.1
Genomic location:
Preferred name:
NM_001458.5(FLNC):c.6468C>T (p.Leu2156=)
HGVS:
  • NC_000007.14:g.128853821C>T
  • NG_011807.1:g.28393C>T
  • NM_001127487.2:c.6369C>T
  • NM_001458.5:c.6468C>TMANE SELECT
  • NP_001120959.1:p.Leu2123=
  • NP_001449.3:p.Leu2156=
  • NP_001449.3:p.Leu2156=
  • LRG_870t1:c.6468C>T
  • LRG_870:g.28393C>T
  • LRG_870p1:p.Leu2156=
  • NC_000007.13:g.128493875C>T
  • NM_001458.4:c.6468C>T
Molecular consequence:
  • NM_001127487.2:c.6369C>T - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_001458.5:c.6468C>T - synonymous variant - [Sequence Ontology: SO:0001819]

Condition(s)

Name:
Cardiovascular phenotype
Identifiers:
MedGen: CN230736

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Assertion and evidence details

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Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV002660716Ambry Genetics
criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)		Likely benign
(Sep 12, 2022) 		germlineclinical testing

Citation Link

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Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Ambry Genetics, SCV002660716.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: May 1, 2024