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NM_004380.3(CREBBP):c.5571C>T (p.His1857=) AND Inborn genetic diseases

Germline classification:
Likely benign (1 submission)
Last evaluated:
Oct 23, 2019
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV002344702.2

Allele description [Variation Report for NM_004380.3(CREBBP):c.5571C>T (p.His1857=)]

NM_004380.3(CREBBP):c.5571C>T (p.His1857=)

Gene:
CREBBP:CREB binding protein [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
16p13.3
Genomic location:
Preferred name:
NM_004380.3(CREBBP):c.5571C>T (p.His1857=)
HGVS:
  • NC_000016.10:g.3729476G>A
  • NG_009873.2:g.156238C>T
  • NM_001079846.1:c.5457C>T
  • NM_004380.3:c.5571C>TMANE SELECT
  • NP_001073315.1:p.His1819=
  • NP_004371.2:p.His1857=
  • LRG_1426t1:c.5571C>T
  • LRG_1426:g.156238C>T
  • LRG_1426p1:p.His1857=
  • NC_000016.9:g.3779477G>A
  • NM_004380.2:c.5571C>T
Molecular consequence:
  • NM_001079846.1:c.5457C>T - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_004380.3:c.5571C>T - synonymous variant - [Sequence Ontology: SO:0001819]

Condition(s)

Name:
Inborn genetic diseases
Identifiers:
MeSH: D030342; MedGen: C0950123

Assertion and evidence details

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Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV002654105Ambry Genetics
criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)		Likely benign
(Oct 23, 2019) 		germlineclinical testing

Citation Link

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Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Ambry Genetics, SCV002654105.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Oct 20, 2024