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NM_004281.4(BAG3):c.625C>G (p.Pro209Ala) AND Myofibrillar myopathy 6

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Aug 30, 2022
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV002305630.1

Allele description [Variation Report for NM_004281.4(BAG3):c.625C>G (p.Pro209Ala)]

NM_004281.4(BAG3):c.625C>G (p.Pro209Ala)

Gene:
BAG3:BAG cochaperone 3 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
10q26.11
Genomic location:
Preferred name:
NM_004281.4(BAG3):c.625C>G (p.Pro209Ala)
HGVS:
  • NC_000010.11:g.119672372C>G
  • NG_016125.1:g.26003C>G
  • NM_004281.4:c.625C>GMANE SELECT
  • NP_004272.2:p.Pro209Ala
  • LRG_742t1:c.625C>G
  • LRG_742:g.26003C>G
  • NC_000010.10:g.121431884C>G
  • NM_004281.3:c.625C>G
Protein change:
P209A
Links:
dbSNP: rs1589630141
NCBI 1000 Genomes Browser:
rs1589630141
Molecular consequence:
  • NM_004281.4:c.625C>G - missense variant - [Sequence Ontology: SO:0001583]
Observations:
1

Condition(s)

Name:
Myofibrillar myopathy 6
Synonyms:
Myofibrillar myopathy, BAG3-related
Identifiers:
MONDO: MONDO:0013061; MedGen: C2751831; Orphanet: 199340; OMIM: 612954

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV002589116Concord Molecular Medicine Laboratory, Concord Repatriation General Hospital
criteria provided, single submitter

(ACMG Guidelines, 2015)
Uncertain significance
(Aug 30, 2022)
unknownclinical testing

PubMed (2)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownyes1not providednot providednot providednot providedclinical testing

Citations

PubMed

Myopathy associated BAG3 mutations lead to protein aggregation by stalling Hsp70 networks.

Meister-Broekema M, Freilich R, Jagadeesan C, Rauch JN, Bengoechea R, Motley WW, Kuiper EFE, Minoia M, Furtado GV, van Waarde MAWH, Bird SJ, Rebelo A, Zuchner S, Pytel P, Scherer SS, Morelli FF, Carra S, Weihl CC, Bergink S, Gestwicki JE, Kampinga HH.

Nat Commun. 2018 Dec 17;9(1):5342. doi: 10.1038/s41467-018-07718-5.

PubMed [citation]
PMID:
30559338
PMCID:
PMC6297355

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee..

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From Concord Molecular Medicine Laboratory, Concord Repatriation General Hospital, SCV002589116.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
11not providednot providedclinical testing PubMed (2)

Description

This variant has been detected in a patient presenting with sensorimotor axonal neuropathy, upper and lower limb muscle weakness with respiratory failure. Nerve biopsy confirmed moderate to severe axonal neuropathy. Electron Microscopy of sural nerve showed moderate loss of myelinated fibres with no abnormal inclusions. Muscle biopsy showed neurogenic atrophy, with ongoing chronic denervation and re-innervation of myofibres with pseudo-dystrophic changes. The c.625C>G variant has not been observed in control population database (gnomAD). The missense change is located within the second IPV motif. Other de novo missense variants in the same amino acid position, e.g. p.Pro209Leu, p.Pro209Gln and p.Pro209Ser have been identified in multiple families with myofibrillar myopathy with neuropathy. There is significant phenotypic variability in Pro209 variants. While the first reported p.Pro209Leu variant leads to a severe myopathy, cardiac and respiratory involvement is only reported in some but not all affected children [PMID: 19085932, 30145633, 32453099]. Later reports of individuals with p.Pro209Ser and p.Pro209Gln variants have adult onset axonal sensorimotor neuropathies with or without myopathy [PMID: 25208129, 28754666, 31853710]. Functional studies of BAG3 showed that the p.Pro209Ala variant did not affect solubility, but there is relative reduction in affinity to heat shock protein Hsp27c [PMID: 30559338]. Based on the current evidence, the BAG3 c.625C>G variant is classified as a variant of uncertain significance (ACMG criteria: PM5, PM2_supporting, PS3_supporting).

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownyesnot providednot providednot provided1not providednot providednot provided

Last Updated: Sep 29, 2024