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NM_000527.5(LDLR):c.1721G>A (p.Arg574His) AND not specified

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
Sep 27, 2022
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV002287397.4

Allele description [Variation Report for NM_000527.5(LDLR):c.1721G>A (p.Arg574His)]

NM_000527.5(LDLR):c.1721G>A (p.Arg574His)

Gene:
LDLR:low density lipoprotein receptor [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
19p13.2
Genomic location:
Preferred name:
NM_000527.5(LDLR):c.1721G>A (p.Arg574His)
Other names:
NM_000527.5(LDLR):c.1721G>A
HGVS:
  • NC_000019.10:g.11116874G>A
  • NG_009060.1:g.32494G>A
  • NM_000527.5:c.1721G>AMANE SELECT
  • NM_001195798.2:c.1721G>A
  • NM_001195799.2:c.1598G>A
  • NM_001195800.2:c.1217G>A
  • NM_001195803.2:c.1340G>A
  • NP_000518.1:p.Arg574His
  • NP_000518.1:p.Arg574His
  • NP_001182727.1:p.Arg574His
  • NP_001182728.1:p.Arg533His
  • NP_001182729.1:p.Arg406His
  • NP_001182732.1:p.Arg447His
  • LRG_274t1:c.1721G>A
  • LRG_274:g.32494G>A
  • LRG_274p1:p.Arg574His
  • NC_000019.9:g.11227550G>A
  • NM_000527.4:c.1721G>A
  • P01130:p.Arg574His
  • c.1721G>A
Protein change:
R406H
Links:
LDLR-LOVD, British Heart Foundation: LDLR_000233; UniProtKB: P01130#VAR_072852
Molecular consequence:
  • NM_000527.5:c.1721G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001195798.2:c.1721G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001195799.2:c.1598G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001195800.2:c.1217G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001195803.2:c.1340G>A - missense variant - [Sequence Ontology: SO:0001583]
Observations:
1

Condition(s)

Synonyms:
AllHighlyPenetrant
Identifiers:
MedGen: CN169374

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV002578127Institute for Medical Genetics and Human Genetics, Charité - Universitätsmedizin Berlin

See additional submitters

criteria provided, single submitter

(ACMG Guidelines, 2015)
Likely pathogenic
(Sep 27, 2022)
germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyes1not providednot provided1not providedclinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee..

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From Institute for Medical Genetics and Human Genetics, Charité - Universitätsmedizin Berlin, SCV002578127.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyes1Bloodnot provided1not providednot providednot provided

Last Updated: Oct 20, 2024