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NM_001754.5(RUNX1):c.164C>A (p.Ala55Glu) AND Acute myeloid leukemia

Germline classification:
Likely pathogenic (1 submission)
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV002276633.1

Allele description [Variation Report for NM_001754.5(RUNX1):c.164C>A (p.Ala55Glu)]

NM_001754.5(RUNX1):c.164C>A (p.Ala55Glu)

Gene:
RUNX1:RUNX family transcription factor 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
21q22.12
Genomic location:
Preferred name:
NM_001754.5(RUNX1):c.164C>A (p.Ala55Glu)
HGVS:
  • NC_000021.9:g.34887030G>T
  • NG_011402.2:g.1102682C>A
  • NM_001001890.3:c.83C>A
  • NM_001122607.2:c.83C>A
  • NM_001754.5:c.164C>AMANE SELECT
  • NP_001001890.1:p.Ala28Glu
  • NP_001116079.1:p.Ala28Glu
  • NP_001745.2:p.Ala55Glu
  • LRG_482t1:c.164C>A
  • LRG_482:g.1102682C>A
  • NC_000021.8:g.36259327G>T
  • NM_001001890.2:c.83C>A
  • NM_001754.4:c.164C>A
Protein change:
A28E
Links:
dbSNP: rs1473182680
NCBI 1000 Genomes Browser:
rs1473182680
Molecular consequence:
  • NM_001001890.3:c.83C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001122607.2:c.83C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001754.5:c.164C>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Acute myeloid leukemia (AML)
Synonyms:
Acute myeloid leukemia, adult; AML adult; Acute myelogenous leukemia; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0018874; MeSH: D015470; MedGen: C0023467; Orphanet: 519; OMIM: 601626; Human Phenotype Ontology: HP:0004808

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV002564647Nadeem Sheikh Lab, University of the Punjab
no assertion criteria provided
Likely pathogenicsomaticclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
South Asiansomaticyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Nadeem Sheikh Lab, University of the Punjab, SCV002564647.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1South Asiannot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1somaticyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Apr 9, 2023