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NM_000233.4(LHCGR):c.50_55dup (p.Gln18_Pro19insLeuGln) AND Luteinizing hormone/choriogonadotropin receptor, lq variant

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Apr 1, 2003
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV002270219.1

Allele description [Variation Report for NM_000233.4(LHCGR):c.50_55dup (p.Gln18_Pro19insLeuGln)]

NM_000233.4(LHCGR):c.50_55dup (p.Gln18_Pro19insLeuGln)

Genes:
STON1-GTF2A1L:STON1-GTF2A1L readthrough [Gene - HGNC]
LHCGR:luteinizing hormone/choriogonadotropin receptor [Gene - OMIM - HGNC]
Variant type:
Duplication
Cytogenetic location:
2p16.3
Genomic location:
Preferred name:
NM_000233.4(LHCGR):c.50_55dup (p.Gln18_Pro19insLeuGln)
Other names:
LHCGR, LEU-GLN INS, CODON 19-20
HGVS:
  • NC_000002.12:g.48755619_48755624dup
  • NG_008193.2:g.5120_5125dup
  • NG_033050.2:g.230695_230700dup
  • NG_095198.1:g.438_443dup
  • NM_000233.4:c.50_55dupMANE SELECT
  • NM_001198593.2:c.3442-20661_3442-20656dup
  • NP_000224.2:p.Gln18_Pro19insLeuGln
  • NC_000002.11:g.48982755_48982756insGCTGCA
  • NC_000002.11:g.48982758_48982763dup
  • NM_000233.3:c.50_55dupTGCAGC
Links:
OMIM: 152790.0017; dbSNP: rs71245621
NCBI 1000 Genomes Browser:
rs71245621
Molecular consequence:
  • NM_000233.4:c.50_55dup - inframe_insertion - [Sequence Ontology: SO:0001821]
  • NM_001198593.2:c.3442-20661_3442-20656dup - intron variant - [Sequence Ontology: SO:0001627]

Condition(s)

Name:
Luteinizing hormone/choriogonadotropin receptor, lq variant
Identifiers:

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000035747OMIM
no assertion criteria provided
Pathogenic
(Apr 1, 2003)
germlineliterature only

PubMed (4)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenot providednot providednot providednot providednot providednot providedliterature only

Citations

PubMed

Cloning and sequencing of human LH/hCG receptor cDNA.

Minegishi T, Nakamura K, Takakura Y, Miyamoto K, Hasegawa Y, Ibuki Y, Igarashi M, Minegish T [corrected to Minegishi T].

Biochem Biophys Res Commun. 1990 Nov 15;172(3):1049-54. Erratum in: Biochem Biophys Res Commun 1994 Jun 15;201(2):1057.

PubMed [citation]
PMID:
2244890

Structure of the human luteinizing hormone-choriogonadotropin receptor gene: unusual promoter and 5' non-coding regions.

Atger M, Misrahi M, Sar S, Le Flem L, Dessen P, Milgrom E.

Mol Cell Endocrinol. 1995 Jun;111(2):113-23.

PubMed [citation]
PMID:
7556872
See all PubMed Citations (4)

Details of each submission

From OMIM, SCV000035747.4

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (4)

Description

Two different human LH receptor sequences have been published, differing by a 6-basepair insertion encoding leu-gln at position 55-60 (Minegishi et al., 1990; Atger et al., 1995). Rodien et al. (1998) demonstrated that both sequences exist as allelic variants in the Caucasian population. Allele frequencies of LQ variant and wildtype allele are 0.26 and 0.74 respectively. In contrast, the LQ allele is virtually absent from the Japanese population. Functional characterization of both alleles by transient expression in COS-7 cells did not reveal any difference between the 2 receptors, neither for cell surface expression nor for cAMP production and sensitivity to CG/LH.

Powell et al. (2003) investigated whether functional polymorphic variants in the LH signaling pathway are associated with the risk of breast cancer or its clinical phenotype. Women who were homozygous for the LQ allele were, on average, 8.3 years younger at diagnosis, compared with those homozygous for the wildtype LHR allele (mean age, 51.9 years vs 60.2 years; P = 0.03). Trends were observed for associations between LQ carriers and nodal involvement or larger tumor size. Patients who were LQ carriers revealed a significantly worse overall survival, compared with those who were homozygous for wildtype LHR. The authors concluded that their findings suggested that the LQ gene polymorphism determines an earlier age of disease onset and is prognostic for poor outcome of breast cancer.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot providednot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024