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NM_017882.3(CLN6):c.406C>T (p.Arg136Cys) AND Ceroid lipofuscinosis, neuronal, 6B (Kufs type)

Germline classification:
Pathogenic (1 submission)
Last evaluated:
May 4, 2022
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV002249523.1

Allele description [Variation Report for NM_017882.3(CLN6):c.406C>T (p.Arg136Cys)]

NM_017882.3(CLN6):c.406C>T (p.Arg136Cys)

Gene:
CLN6:CLN6 transmembrane ER protein [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
15q23
Genomic location:
Preferred name:
NM_017882.3(CLN6):c.406C>T (p.Arg136Cys)
HGVS:
  • NC_000015.10:g.68211755G>A
  • NG_008764.2:g.50457C>T
  • NM_017882.3:c.406C>TMANE SELECT
  • NP_060352.1:p.Arg136Cys
  • LRG_832t1:c.406C>T
  • LRG_832:g.50457C>T
  • LRG_832p1:p.Arg136Cys
  • NC_000015.9:g.68504093G>A
  • NM_017882.2:c.406C>T
Protein change:
R136C
Links:
dbSNP: rs1012449574
NCBI 1000 Genomes Browser:
rs1012449574
Molecular consequence:
  • NM_017882.3:c.406C>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Ceroid lipofuscinosis, neuronal, 6B (Kufs type)
Synonyms:
Ceroid lipofuscinosis neuronal 4A autosomal recessive; Neuronal ceroid lipofuscinosis 4A
Identifiers:
MONDO: MONDO:0008768; MedGen: C5561927; OMIM: 204300

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV002518723Mendelics
criteria provided, single submitter

(Mendelics Assertion Criteria 2019)		Pathogenic
(May 4, 2022) 		germlineclinical testing

Citation Link

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Mendelics, SCV002518723.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Mar 16, 2024