U.S. flag

An official website of the United States government

NM_153240.5(NPHP3):c.2805C>T (p.Gly935=) AND Renal-hepatic-pancreatic dysplasia 1

Germline classification:
Pathogenic (1 submission)
Last evaluated:
May 4, 2022
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV002246283.1

Allele description [Variation Report for NM_153240.5(NPHP3):c.2805C>T (p.Gly935=)]

NM_153240.5(NPHP3):c.2805C>T (p.Gly935=)

Genes:
NPHP3-ACAD11:NPHP3-ACAD11 readthrough (NMD candidate) [Gene - HGNC]
NPHP3:nephrocystin 3 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
3q22.1
Genomic location:
Preferred name:
NM_153240.5(NPHP3):c.2805C>T (p.Gly935=)
HGVS:
  • NC_000003.12:g.132689152G>A
  • NG_008130.2:g.38281C>T
  • NM_153240.5:c.2805C>TMANE SELECT
  • NP_694972.3:p.Gly935=
  • NC_000003.11:g.132407996G>A
  • NG_008130.1:g.38281C>T
  • NM_153240.4:c.2805C>T
  • NR_037804.1:n.2811C>T
Links:
dbSNP: rs1281725083
NCBI 1000 Genomes Browser:
rs1281725083
Molecular consequence:
  • NR_037804.1:n.2811C>T - non-coding transcript variant - [Sequence Ontology: SO:0001619]
  • NM_153240.5:c.2805C>T - synonymous variant - [Sequence Ontology: SO:0001819]
Functional consequence:
effect on RNA splicing [Variation Ontology: 0362]

Condition(s)

Name:
Renal-hepatic-pancreatic dysplasia 1 (RHPD1)
Identifiers:
MONDO: MONDO:0008833; MedGen: C3715199; OMIM: 208540

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV002517810Mendelics
criteria provided, single submitter

(Mendelics Assertion Criteria 2019)
Pathogenic
(May 4, 2022)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Mendelics, SCV002517810.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024