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NM_000527.5(LDLR):c.1575T>G (p.Asp525Glu) AND not provided

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Oct 19, 2021
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV002223995.1

Allele description [Variation Report for NM_000527.5(LDLR):c.1575T>G (p.Asp525Glu)]

NM_000527.5(LDLR):c.1575T>G (p.Asp525Glu)

Gene:
LDLR:low density lipoprotein receptor [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
19p13.2
Genomic location:
Preferred name:
NM_000527.5(LDLR):c.1575T>G (p.Asp525Glu)
HGVS:
  • NC_000019.10:g.11113751T>G
  • NG_009060.1:g.29371T>G
  • NM_000527.5:c.1575T>GMANE SELECT
  • NM_001195798.2:c.1575T>G
  • NM_001195799.2:c.1452T>G
  • NM_001195800.2:c.1071T>G
  • NM_001195803.2:c.1194T>G
  • NP_000518.1:p.Asp525Glu
  • NP_001182727.1:p.Asp525Glu
  • NP_001182728.1:p.Asp484Glu
  • NP_001182729.1:p.Asp357Glu
  • NP_001182732.1:p.Asp398Glu
  • LRG_274t1:c.1575T>G
  • LRG_274:g.29371T>G
  • NC_000019.9:g.11224427T>G
  • NC_000019.9:g.11224427T>G
  • NM_000527.4:c.1575T>G
Protein change:
D357E
Links:
dbSNP: rs763884010
NCBI 1000 Genomes Browser:
rs763884010
Molecular consequence:
  • NM_000527.5:c.1575T>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001195798.2:c.1575T>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001195799.2:c.1452T>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001195800.2:c.1071T>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001195803.2:c.1194T>G - missense variant - [Sequence Ontology: SO:0001583]
Observations:
1

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV002502529AiLife Diagnostics, AiLife Diagnostics
criteria provided, single submitter

(ACMG Guidelines, 2015)
Uncertain significance
(Oct 19, 2021)
germlineclinical testing

PubMed (3)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyes1not providednot providednot providednot providedclinical testing

Citations

PubMed

Harmonizing Clinical Sequencing and Interpretation for the eMERGE III Network.

eMERGE Consortium. Electronic address: agibbs@bcm.edu.; eMERGE Consortium..

Am J Hum Genet. 2019 Sep 5;105(3):588-605. doi: 10.1016/j.ajhg.2019.07.018. Epub 2019 Aug 22.

PubMed [citation]
PMID:
31447099
PMCID:
PMC6731372

Six years' experience with LipidSeq: clinical and research learnings from a hybrid, targeted sequencing panel for dyslipidemias.

Dron JS, Wang J, McIntyre AD, Iacocca MA, Robinson JF, Ban MR, Cao H, Hegele RA.

BMC Med Genomics. 2020 Feb 10;13(1):23. doi: 10.1186/s12920-020-0669-2.

PubMed [citation]
PMID:
32041611
PMCID:
PMC7011550
See all PubMed Citations (3)

Details of each submission

From AiLife Diagnostics, AiLife Diagnostics, SCV002502529.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testing PubMed (3)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot provided1not providednot providednot provided

Last Updated: Sep 1, 2024