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NM_000527.5(LDLR):c.1936C>A (p.Leu646Ile) AND not provided

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Feb 11, 2022
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV002223828.1

Allele description [Variation Report for NM_000527.5(LDLR):c.1936C>A (p.Leu646Ile)]

NM_000527.5(LDLR):c.1936C>A (p.Leu646Ile)

Gene:
LDLR:low density lipoprotein receptor [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
19p13.2
Genomic location:
Preferred name:
NM_000527.5(LDLR):c.1936C>A (p.Leu646Ile)
HGVS:
  • NC_000019.10:g.11120182C>A
  • NG_009060.1:g.35802C>A
  • NM_000527.5:c.1936C>AMANE SELECT
  • NM_001195798.2:c.1936C>A
  • NM_001195799.2:c.1813C>A
  • NM_001195800.2:c.1432C>A
  • NM_001195803.2:c.1555C>A
  • NP_000518.1:p.Leu646Ile
  • NP_001182727.1:p.Leu646Ile
  • NP_001182728.1:p.Leu605Ile
  • NP_001182729.1:p.Leu478Ile
  • NP_001182732.1:p.Leu519Ile
  • LRG_274:g.35802C>A
  • NC_000019.9:g.11230858C>A
  • c.1936C>A
Protein change:
L478I
Links:
LDLR-LOVD, British Heart Foundation: LDLR_001556; dbSNP: rs779940524
NCBI 1000 Genomes Browser:
rs779940524
Molecular consequence:
  • NM_000527.5:c.1936C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001195798.2:c.1936C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001195799.2:c.1813C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001195800.2:c.1432C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001195803.2:c.1555C>A - missense variant - [Sequence Ontology: SO:0001583]
Observations:
1

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV002501984AiLife Diagnostics, AiLife Diagnostics
criteria provided, single submitter

(ACMG Guidelines, 2015)
Uncertain significance
(Feb 11, 2022)
germlineclinical testing

PubMed (3)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyes1not providednot providednot providednot providedclinical testing

Citations

PubMed

Familial hypercholesterolemia mutations in Petrozavodsk: no similarity to St. Petersburg mutation spectrum.

Komarova TY, Korneva VA, Kuznetsova TY, Golovina AS, Vasilyev VB, Mandelshtam MY.

BMC Med Genet. 2013 Dec 27;14:128. doi: 10.1186/1471-2350-14-128.

PubMed [citation]
PMID:
24373485
PMCID:
PMC3877960

Exome sequencing identifies rare LDLR and APOA5 alleles conferring risk for myocardial infarction.

Do R, Stitziel NO, Won HH, Jørgensen AB, Duga S, Angelica Merlini P, Kiezun A, Farrall M, Goel A, Zuk O, Guella I, Asselta R, Lange LA, Peloso GM, Auer PL; NHLBI Exome Sequencing Project., Girelli D, Martinelli N, Farlow DN, DePristo MA, Roberts R, Stewart AF, et al.

Nature. 2015 Feb 5;518(7537):102-6. doi: 10.1038/nature13917. Epub 2014 Dec 10.

PubMed [citation]
PMID:
25487149
PMCID:
PMC4319990
See all PubMed Citations (3)

Details of each submission

From AiLife Diagnostics, AiLife Diagnostics, SCV002501984.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testing PubMed (3)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot provided1not providednot providednot provided

Last Updated: May 7, 2024