NM_014780.5(CUL7):c.733-32_733-17del AND not provided

Germline classification:: Likely benign (1 submission)
Last evaluated:: Aug 8, 2021
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV002073777.6

Allele description [Variation Report for NM_014780.5(CUL7):c.733-32_733-17del]

NM_014780.5(CUL7):c.733-32_733-17del

Gene:

CUL7:cullin 7 [Gene - OMIM - HGNC]

Variant type:

Deletion

Cytogenetic location:

6p21.1

Genomic location:

Preferred name:

NM_014780.5(CUL7):c.733-32_733-17del

HGVS:

NC_000006.12:g.43051488_43051503del
NG_016205.1:g.7446_7461del
NM_001168370.2:c.829-32_829-17del
NM_001374872.1:c.829-32_829-17del
NM_001374873.1:c.733-32_733-17del
NM_001374874.1:c.733-32_733-17del
NM_014780.5:c.733-32_733-17delMANE SELECT
NC_000006.11:g.43019223_43019238del
NC_000006.11:g.43019226_43019241del

Links:

dbSNP: rs2150335923

NCBI 1000 Genomes Browser:

rs2150335923

Molecular consequence:

NM_001168370.2:c.829-32_829-17del - intron variant - [Sequence Ontology: SO:0001627]
NM_001374872.1:c.829-32_829-17del - intron variant - [Sequence Ontology: SO:0001627]
NM_001374873.1:c.733-32_733-17del - intron variant - [Sequence Ontology: SO:0001627]
NM_001374874.1:c.733-32_733-17del - intron variant - [Sequence Ontology: SO:0001627]
NM_014780.5:c.733-32_733-17del - intron variant - [Sequence Ontology: SO:0001627]

Condition(s)

Synonyms:: none provided
Identifiers:: MedGen: C3661900

Recent activity

Clear Turn Off Turn On

CBTC1759.fwd NICHD_XGC_tropBone1 Xenopus tropicalis cDNA clone IMAGE:8934130 5',...
CBTC1759.fwd NICHD_XGC_tropBone1 Xenopus tropicalis cDNA clone IMAGE:8934130 5', mRNA sequence
gi|126262071|gnl|dbEST|45035735|gb| 183.1|

Nucleotide
CBTC11610.rev NICHD_XGC_tropBone1 Xenopus tropicalis cDNA clone IMAGE:8942353 3'...
CBTC11610.rev NICHD_XGC_tropBone1 Xenopus tropicalis cDNA clone IMAGE:8942353 3', mRNA sequence
gi|126260856|gnl|dbEST|45034520|gb| 968.1|

Nucleotide
CBTC9769.fwd NICHD_XGC_tropBone1 Xenopus tropicalis cDNA clone IMAGE:8940405 5',...
CBTC9769.fwd NICHD_XGC_tropBone1 Xenopus tropicalis cDNA clone IMAGE:8940405 5', mRNA sequence
gi|126271759|gnl|dbEST|45045588|gb| 036.1|

Nucleotide
CBTC7612.rev NICHD_XGC_tropBone1 Xenopus tropicalis cDNA clone IMAGE:8939770 3',...
CBTC7612.rev NICHD_XGC_tropBone1 Xenopus tropicalis cDNA clone IMAGE:8939770 3', mRNA sequence
gi|126270555|gnl|dbEST|45044384|gb| 832.1|

Nucleotide
CBTC7250.rev NICHD_XGC_tropBone1 Xenopus tropicalis cDNA clone IMAGE:8939296 3',...
CBTC7250.rev NICHD_XGC_tropBone1 Xenopus tropicalis cDNA clone IMAGE:8939296 3', mRNA sequence
gi|126270039|gnl|dbEST|45043866|gb| 314.1|

Nucleotide

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV002371787	Labcorp Genetics (formerly Invitae), Labcorp	criteria provided, single submitter (Invitae Variant Classification Sherloc (09022015))	Likely benign (Aug 8, 2021)	germline	clinical testing	PubMed (1) [See all records that cite this PMID]

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV002371787

Labcorp Genetics (formerly Invitae), Labcorp

criteria provided, single submitter

(Invitae Variant Classification Sherloc (09022015))

Likely benign
(Aug 8, 2021)

germline

clinical testing

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Citations

PubMed

Sherloc: a comprehensive refinement of the ACMG-AMP variant classification criteria.

Nykamp K, Anderson M, Powers M, Garcia J, Herrera B, Ho YY, Kobayashi Y, Patil N, Thusberg J, Westbrook M; Invitae Clinical Genomics Group., Topper S.

Genet Med. 2017 Oct;19(10):1105-1117. doi: 10.1038/gim.2017.37. Epub 2017 May 11. Erratum in: Genet Med. 2020 Jan;22(1):240. doi: 10.1038/s41436-019-0624-9.

PubMed [citation]

PMID:: 28492532
PMCID:: PMC5632818

Details of each submission

From Labcorp Genetics (formerly Invitae), Labcorp, SCV002371787.3

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	PubMed (1)

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Sep 29, 2024

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