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NM_000527.5(LDLR):c.859G>A (p.Gly287Ser) AND Hypercholesterolemia

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Jun 1, 2014
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV002051673.10

Allele description [Variation Report for NM_000527.5(LDLR):c.859G>A (p.Gly287Ser)]

NM_000527.5(LDLR):c.859G>A (p.Gly287Ser)

Gene:
LDLR:low density lipoprotein receptor [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
19p13.2
Genomic location:
Preferred name:
NM_000527.5(LDLR):c.859G>A (p.Gly287Ser)
Other names:
NM_000527.5(LDLR):c.859G>A; p.Gly287Ser
HGVS:
  • NC_000019.10:g.11107433G>A
  • NG_009060.1:g.23053G>A
  • NM_000527.5:c.859G>AMANE SELECT
  • NM_001195798.2:c.859G>A
  • NM_001195799.2:c.736G>A
  • NM_001195800.2:c.355G>A
  • NM_001195803.2:c.478G>A
  • NP_000518.1:p.Gly287Ser
  • NP_000518.1:p.Gly287Ser
  • NP_001182727.1:p.Gly287Ser
  • NP_001182728.1:p.Gly246Ser
  • NP_001182729.1:p.Gly119Ser
  • NP_001182732.1:p.Gly160Ser
  • LRG_274t1:c.859G>A
  • LRG_274:g.23053G>A
  • LRG_274p1:p.Gly287Ser
  • NC_000019.9:g.11218109G>A
  • NM_000527.4:c.859G>A
  • c.859G>A
Protein change:
G119S
Links:
LDLR-LOVD, British Heart Foundation: LDLR_001848; dbSNP: rs375495026
NCBI 1000 Genomes Browser:
rs375495026
Molecular consequence:
  • NM_000527.5:c.859G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001195798.2:c.859G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001195799.2:c.736G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001195800.2:c.355G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001195803.2:c.478G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Hypercholesterolemia
Synonyms:
Primary hypercholesterolemia; Hypercholesterolaemia
Identifiers:
MeSH: D006937; MedGen: C0020443; Human Phenotype Ontology: HP:0003124

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000190301CSER _CC_NCGL, University of Washington - ESP 6500 variant annotation
no assertion criteria provided
Uncertain significance
(Jun 1, 2014)
germlineresearch

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedresearch

Details of each submission

From CSER _CC_NCGL, University of Washington - ESP 6500 variant annotation, SCV000190301.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedresearchnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Oct 26, 2024