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NM_000190.4(HMBS):c.1063C>T (p.Arg355Trp) AND Acute intermittent porphyria

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Jan 13, 2021
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001837235.1

Allele description [Variation Report for NM_000190.4(HMBS):c.1063C>T (p.Arg355Trp)]

NM_000190.4(HMBS):c.1063C>T (p.Arg355Trp)

Gene:
HMBS:hydroxymethylbilane synthase [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
11q23.3
Genomic location:
Preferred name:
NM_000190.4(HMBS):c.1063C>T (p.Arg355Trp)
HGVS:
  • NC_000011.10:g.119093260C>T
  • NG_008093.1:g.13384C>T
  • NM_000190.4:c.1063C>TMANE SELECT
  • NM_001024382.2:c.1012C>T
  • NM_001258208.2:c.943C>T
  • NM_001258209.2:c.892C>T
  • NP_000181.2:p.Arg355Trp
  • NP_001019553.1:p.Arg338Trp
  • NP_001245137.1:p.Arg315Trp
  • NP_001245138.1:p.Arg298Trp
  • LRG_1076t1:c.1063C>T
  • LRG_1076t2:c.1012C>T
  • LRG_1076:g.13384C>T
  • LRG_1076p1:p.Arg355Trp
  • LRG_1076p2:p.Arg338Trp
  • NC_000011.9:g.118963970C>T
Protein change:
R298W
Links:
dbSNP: rs769409620
NCBI 1000 Genomes Browser:
rs769409620
Molecular consequence:
  • NM_000190.4:c.1063C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001024382.2:c.1012C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001258208.2:c.943C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001258209.2:c.892C>T - missense variant - [Sequence Ontology: SO:0001583]
Observations:
1

Condition(s)

Name:
Acute intermittent porphyria (AIP)
Synonyms:
Porphobilinogen deaminase deficiency; Uroporphyrinogen synthase deficiency; UPS deficiency; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0008294; MedGen: C0162565; Orphanet: 79276; OMIM: 176000

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV002097739New York Genome Center - CSER-NYCKidSeq
criteria provided, single submitter

(NYGC Assertion Criteria 2020)
Uncertain significance
(Jan 13, 2021)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknown1not providednot provided1not providedclinical testing

Details of each submission

From New York Genome Center - CSER-NYCKidSeq, SCV002097739.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknown1not providednot provided1not providednot providednot provided

Last Updated: Sep 29, 2024