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NM_000478.6(ALPL):c.212G>A (p.Arg71His) AND Hypophosphatasia

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Apr 18, 2019
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001836391.1

Allele description [Variation Report for NM_000478.6(ALPL):c.212G>A (p.Arg71His)]

NM_000478.6(ALPL):c.212G>A (p.Arg71His)

Gene:
ALPL:alkaline phosphatase, biomineralization associated [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
1p36.12
Genomic location:
Preferred name:
NM_000478.6(ALPL):c.212G>A (p.Arg71His)
HGVS:
  • NC_000001.11:g.21561127G>A
  • NG_008940.1:g.56763G>A
  • NM_000478.6:c.212G>AMANE SELECT
  • NM_001127501.4:c.47G>A
  • NM_001177520.3:c.66+382G>A
  • NM_001369803.2:c.212G>A
  • NM_001369804.2:c.212G>A
  • NM_001369805.2:c.212G>A
  • NP_000469.3:p.Arg71His
  • NP_001120973.2:p.Arg16His
  • NP_001356732.1:p.Arg71His
  • NP_001356733.1:p.Arg71His
  • NP_001356734.1:p.Arg71His
  • NC_000001.10:g.21887620G>A
  • NM_000478.4:c.212G>A
Protein change:
R16H
Links:
dbSNP: rs121918003
NCBI 1000 Genomes Browser:
rs121918003
Molecular consequence:
  • NM_001177520.3:c.66+382G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_000478.6:c.212G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001127501.4:c.47G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001369803.2:c.212G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001369804.2:c.212G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001369805.2:c.212G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Hypophosphatasia
Synonyms:
Phosphoethanol-aminuria
Identifiers:
MONDO: MONDO:0018570; MedGen: C0020630

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV002094050Natera, Inc.
no assertion criteria provided
Pathogenic
(Apr 18, 2019)
germlineclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Natera, Inc., SCV002094050.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Oct 8, 2024