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NM_152419.3(HGSNAT):c.1796T>C (p.Leu599Pro) AND Mucopolysaccharidosis, MPS-III-C

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Apr 14, 2020
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001835433.1

Allele description [Variation Report for NM_152419.3(HGSNAT):c.1796T>C (p.Leu599Pro)]

NM_152419.3(HGSNAT):c.1796T>C (p.Leu599Pro)

Gene:
HGSNAT:heparan-alpha-glucosaminide N-acetyltransferase [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
8p11.21
Genomic location:
Preferred name:
NM_152419.3(HGSNAT):c.1796T>C (p.Leu599Pro)
HGVS:
  • NC_000008.11:g.43199457T>C
  • NG_009552.1:g.64009T>C
  • NM_001363227.2:c.1883T>C
  • NM_001363228.2:c.1604T>C
  • NM_001363229.2:c.932T>C
  • NM_152419.3:c.1796T>CMANE SELECT
  • NP_001350156.1:p.Leu628Pro
  • NP_001350157.1:p.Leu535Pro
  • NP_001350158.1:p.Leu311Pro
  • NP_689632.2:p.Leu599Pro
  • NC_000008.10:g.43054600T>C
Protein change:
L311P
Links:
dbSNP: rs928930218
NCBI 1000 Genomes Browser:
rs928930218
Molecular consequence:
  • NM_001363227.2:c.1883T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001363228.2:c.1604T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001363229.2:c.932T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_152419.3:c.1796T>C - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Mucopolysaccharidosis, MPS-III-C (MPS3C)
Synonyms:
Mucopoly-saccharidosis type 3C; Sanfilippo syndrome C; Acetyl-CoA alpha-glucosaminide n-acetyltransferase deficiency; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0009657; MedGen: C0086649; Orphanet: 581; Orphanet: 79271; OMIM: 252930

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV002083331Natera, Inc.
no assertion criteria provided
Uncertain significance
(Apr 14, 2020)
germlineclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Natera, Inc., SCV002083331.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024