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NM_005629.4(SLC6A8):c.1162G>A (p.Ala388Thr) AND Creatine deficiency syndrome 1

Germline classification:
Likely benign (1 submission)
Last evaluated:
Jan 24, 2020
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001834620.2

Allele description [Variation Report for NM_005629.4(SLC6A8):c.1162G>A (p.Ala388Thr)]

NM_005629.4(SLC6A8):c.1162G>A (p.Ala388Thr)

Gene:
SLC6A8:solute carrier family 6 member 8 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
Xq28
Genomic location:
Preferred name:
NM_005629.4(SLC6A8):c.1162G>A (p.Ala388Thr)
Other names:
NM_005629.4(SLC6A8):c.1162G>A; p.Ala388Thr
HGVS:
  • NC_000023.11:g.153693925G>A
  • NG_012016.2:g.10629G>A
  • NM_001142805.2:c.1132G>A
  • NM_001142806.1:c.817G>A
  • NM_005629.4:c.1162G>AMANE SELECT
  • NP_001136277.1:p.Ala378Thr
  • NP_001136278.1:p.Ala273Thr
  • NP_005620.1:p.Ala388Thr
  • NC_000023.10:g.152959380G>A
  • NG_012016.1:g.10629G>A
  • NM_005629.3:c.1162G>A
Protein change:
A273T
Links:
dbSNP: rs374163604
NCBI 1000 Genomes Browser:
rs374163604
Molecular consequence:
  • NM_001142805.2:c.1132G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001142806.1:c.817G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_005629.4:c.1162G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Creatine deficiency syndrome 1
Identifiers:

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV002084559Natera, Inc.
no assertion criteria provided
Likely benign
(Jan 24, 2020)
germlineclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Natera, Inc., SCV002084559.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Oct 20, 2024