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NM_000052.7(ATP7A):c.1734C>T (p.Cys578=) AND Menkes kinky-hair syndrome

Germline classification:
Likely benign (1 submission)
Last evaluated:
Jun 23, 2020
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001833356.1

Allele description [Variation Report for NM_000052.7(ATP7A):c.1734C>T (p.Cys578=)]

NM_000052.7(ATP7A):c.1734C>T (p.Cys578=)

Gene:
ATP7A:ATPase copper transporting alpha [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
Xq21.1
Genomic location:
Preferred name:
NM_000052.7(ATP7A):c.1734C>T (p.Cys578=)
HGVS:
  • NC_000023.11:g.78009128C>T
  • NG_013224.2:g.103432C>T
  • NM_000052.7:c.1734C>TMANE SELECT
  • NM_001282224.2:c.1734C>T
  • NP_000043.4:p.Cys578=
  • NP_001269153.1:p.Cys578=
  • NC_000023.10:g.77264625C>T
  • NM_000052.6:c.1734C>T
Links:
dbSNP: rs72554638
NCBI 1000 Genomes Browser:
rs72554638
Molecular consequence:
  • NM_000052.7:c.1734C>T - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_001282224.2:c.1734C>T - synonymous variant - [Sequence Ontology: SO:0001819]

Condition(s)

Name:
Menkes kinky-hair syndrome (MNK)
Synonyms:
Kinky hair disease; Copper transport disease; Menkes Disease
Identifiers:
MONDO: MONDO:0010651; MedGen: C0022716; Orphanet: 565; OMIM: 309400

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV002089061Natera, Inc.
no assertion criteria provided
Likely benign
(Jun 23, 2020) 		germlineclinical testing

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Natera, Inc., SCV002089061.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024