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NM_000527.5(LDLR):c.370C>T (p.Arg124Trp) AND Familial hypercholesterolemia

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Feb 25, 2020
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001833251.1

Allele description [Variation Report for NM_000527.5(LDLR):c.370C>T (p.Arg124Trp)]

NM_000527.5(LDLR):c.370C>T (p.Arg124Trp)

Gene:
LDLR:low density lipoprotein receptor [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
19p13.2
Genomic location:
Preferred name:
NM_000527.5(LDLR):c.370C>T (p.Arg124Trp)
Other names:
FH Utah
HGVS:
  • NC_000019.10:g.11105276C>T
  • NG_009060.1:g.20896C>T
  • NM_000527.5:c.370C>TMANE SELECT
  • NM_001195798.2:c.370C>T
  • NM_001195799.2:c.247C>T
  • NM_001195800.2:c.314-2116C>T
  • NM_001195803.2:c.314-1289C>T
  • NP_000518.1:p.Arg124Trp
  • NP_000518.1:p.Arg124Trp
  • NP_001182727.1:p.Arg124Trp
  • NP_001182728.1:p.Arg83Trp
  • LRG_274t1:c.370C>T
  • LRG_274:g.20896C>T
  • LRG_274p1:p.Arg124Trp
  • NC_000019.9:g.11215952C>T
  • NM_000527.4:c.370C>T
  • c.370C>T
Protein change:
R124W
Links:
LDLR-LOVD, British Heart Foundation: LDLR_000692; dbSNP: rs879254498
NCBI 1000 Genomes Browser:
rs879254498
Molecular consequence:
  • NM_001195800.2:c.314-2116C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001195803.2:c.314-1289C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_000527.5:c.370C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001195798.2:c.370C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001195799.2:c.247C>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Familial hypercholesterolemia
Identifiers:
MONDO: MONDO:0005439; MedGen: C0020445; OMIM: PS143890

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV002086365Natera, Inc.
no assertion criteria provided
Uncertain significance
(Feb 25, 2020)
germlineclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Natera, Inc., SCV002086365.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 1, 2024