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NM_001365088.1(SLC12A6):c.374G>T (p.Gly125Val) AND Agenesis of the corpus callosum with peripheral neuropathy

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Nov 11, 2019
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001829501.1

Allele description [Variation Report for NM_001365088.1(SLC12A6):c.374G>T (p.Gly125Val)]

NM_001365088.1(SLC12A6):c.374G>T (p.Gly125Val)

Gene:
SLC12A6:solute carrier family 12 member 6 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
15q14
Genomic location:
Preferred name:
NM_001365088.1(SLC12A6):c.374G>T (p.Gly125Val)
HGVS:
  • NC_000015.10:g.34260963C>A
  • NG_007951.1:g.82102G>T
  • NM_001042494.2:c.197G>T
  • NM_001042495.2:c.197G>T
  • NM_001042496.2:c.347G>T
  • NM_001042497.2:c.329G>T
  • NM_001365088.1:c.374G>TMANE SELECT
  • NM_005135.2:c.221G>T
  • NM_133647.2:c.374G>T
  • NP_001035959.1:p.Gly66Val
  • NP_001035960.1:p.Gly66Val
  • NP_001035961.1:p.Gly116Val
  • NP_001035962.1:p.Gly110Val
  • NP_001352017.1:p.Gly125Val
  • NP_005126.1:p.Gly74Val
  • NP_598408.1:p.Gly125Val
  • NP_598408.1:p.Gly125Val
  • LRG_270t1:c.221G>T
  • LRG_270t2:c.374G>T
  • LRG_270:g.82102G>T
  • LRG_270p1:p.Gly74Val
  • LRG_270p2:p.Gly125Val
  • NC_000015.9:g.34553164C>A
  • NM_133647.1:c.374G>T
Protein change:
G110V
Links:
dbSNP: rs759907642
NCBI 1000 Genomes Browser:
rs759907642
Molecular consequence:
  • NM_001042494.2:c.197G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001042495.2:c.197G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001042496.2:c.347G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001042497.2:c.329G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001365088.1:c.374G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_005135.2:c.221G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_133647.2:c.374G>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Agenesis of the corpus callosum with peripheral neuropathy (ACCPN)
Synonyms:
Andermann syndrome; Charlevoix disease; Corpus callosum agenesis neuronopathy; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0000902; MedGen: C0795950; Orphanet: 1496; OMIM: 218000

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV002094368Natera, Inc.
no assertion criteria provided
Uncertain significance
(Nov 11, 2019)
germlineclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Natera, Inc., SCV002094368.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024