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NM_018006.5(TRMU):c.673G>A (p.Gly225Arg) AND Acute infantile liver failure due to synthesis defect of mtDNA-encoded proteins

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Nov 19, 2020
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001827466.1

Allele description [Variation Report for NM_018006.5(TRMU):c.673G>A (p.Gly225Arg)]

NM_018006.5(TRMU):c.673G>A (p.Gly225Arg)

Gene:
TRMU:tRNA mitochondrial 2-thiouridylase [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
22q13.31
Genomic location:
Preferred name:
NM_018006.5(TRMU):c.673G>A (p.Gly225Arg)
HGVS:
  • NC_000022.11:g.46352142G>A
  • NG_012173.1:g.21742G>A
  • NM_001282782.2:c.331G>A
  • NM_001282783.2:c.253G>A
  • NM_001282784.2:c.253G>A
  • NM_001282785.2:c.673G>A
  • NM_018006.5:c.673G>AMANE SELECT
  • NP_001269711.1:p.Gly111Arg
  • NP_001269712.1:p.Gly85Arg
  • NP_001269713.1:p.Gly85Arg
  • NP_001269714.1:p.Gly225Arg
  • NP_060476.2:p.Gly225Arg
  • NC_000022.10:g.46748039G>A
  • NM_018006.4:c.673G>A
  • NR_104240.2:n.669G>A
  • NR_104241.2:n.562G>A
Protein change:
G111R
Links:
dbSNP: rs1253028633
NCBI 1000 Genomes Browser:
rs1253028633
Molecular consequence:
  • NM_001282782.2:c.331G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001282783.2:c.253G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001282784.2:c.253G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001282785.2:c.673G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_018006.5:c.673G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NR_104240.2:n.669G>A - non-coding transcript variant - [Sequence Ontology: SO:0001619]
  • NR_104241.2:n.562G>A - non-coding transcript variant - [Sequence Ontology: SO:0001619]

Condition(s)

Name:
Acute infantile liver failure due to synthesis defect of mtDNA-encoded proteins
Synonyms:
Liver failure acute infantile; LIVER FAILURE, INFANTILE, TRANSIENT
Identifiers:
MONDO: MONDO:0013111; MedGen: C3278664; Orphanet: 217371; OMIM: 613070

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV002076154Natera, Inc.
no assertion criteria provided
Uncertain significance
(Nov 19, 2020) 		germlineclinical testing

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Natera, Inc., SCV002076154.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Dec 24, 2023