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NM_001142800.2(EYS):c.8680G>A (p.Gly2894Ser) AND Retinitis pigmentosa 25

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Dec 3, 2020
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001827369.1

Allele description [Variation Report for NM_001142800.2(EYS):c.8680G>A (p.Gly2894Ser)]

NM_001142800.2(EYS):c.8680G>A (p.Gly2894Ser)

Genes:
PHF3:PHD finger protein 3 [Gene - OMIM - HGNC]
EYS:eyes shut homolog [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
6q12
Genomic location:
Preferred name:
NM_001142800.2(EYS):c.8680G>A (p.Gly2894Ser)
HGVS:
  • NC_000006.12:g.63721351C>T
  • NG_023443.2:g.1990875G>A
  • NG_034034.2:g.90551C>T
  • NM_001142800.2:c.8680G>AMANE SELECT
  • NM_001290259.2:c.*7643C>T
  • NM_001292009.2:c.8743G>A
  • NM_001370348.2:c.*7643C>TMANE SELECT
  • NM_001370349.2:c.*7643C>T
  • NM_001370350.2:c.*7643C>T
  • NM_015153.4:c.*7643C>T
  • NP_001136272.1:p.Gly2894Ser
  • NP_001278938.1:p.Gly2915Ser
  • NC_000006.11:g.64431247C>T
  • NM_001142800.1:c.8680G>A
Protein change:
G2894S
Links:
dbSNP: rs971882330
NCBI 1000 Genomes Browser:
rs971882330
Molecular consequence:
  • NM_001290259.2:c.*7643C>T - 3 prime UTR variant - [Sequence Ontology: SO:0001624]
  • NM_001370348.2:c.*7643C>T - 3 prime UTR variant - [Sequence Ontology: SO:0001624]
  • NM_001370349.2:c.*7643C>T - 3 prime UTR variant - [Sequence Ontology: SO:0001624]
  • NM_001370350.2:c.*7643C>T - 3 prime UTR variant - [Sequence Ontology: SO:0001624]
  • NM_015153.4:c.*7643C>T - 3 prime UTR variant - [Sequence Ontology: SO:0001624]
  • NM_001142800.2:c.8680G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001292009.2:c.8743G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Retinitis pigmentosa 25 (RP25)
Synonyms:
RP 25
Identifiers:
MONDO: MONDO:0011272; MedGen: C1864446; Orphanet: 791; OMIM: 602772

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV002083480Natera, Inc.
no assertion criteria provided
Uncertain significance
(Dec 3, 2020)
germlineclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Natera, Inc., SCV002083480.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024