U.S. flag

An official website of the United States government

NM_002617.4(PEX10):c.425G>A (p.Arg142Gln) AND Zellweger spectrum disorders

Germline classification:
Likely benign (1 submission)
Last evaluated:
Oct 28, 2019
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001825473.1

Allele description [Variation Report for NM_002617.4(PEX10):c.425G>A (p.Arg142Gln)]

NM_002617.4(PEX10):c.425G>A (p.Arg142Gln)

Gene:
PEX10:peroxisomal biogenesis factor 10 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
1p36.32
Genomic location:
Preferred name:
NM_002617.4(PEX10):c.425G>A (p.Arg142Gln)
HGVS:
  • NC_000001.11:g.2408627C>T
  • NG_008342.1:g.8945G>A
  • NM_001374425.1:c.425G>A
  • NM_001374426.1:c.-8G>A
  • NM_001374427.1:c.-8G>A
  • NM_002617.4:c.425G>AMANE SELECT
  • NM_153818.2:c.425G>A
  • NP_001361354.1:p.Arg142Gln
  • NP_002608.1:p.Arg142Gln
  • NP_722540.1:p.Arg142Gln
  • NC_000001.10:g.2340066C>T
  • NM_153818.1:c.425G>A
  • NR_164636.1:n.544G>A
Protein change:
R142Q
Links:
dbSNP: rs138843050
NCBI 1000 Genomes Browser:
rs138843050
Molecular consequence:
  • NM_001374426.1:c.-8G>A - 5 prime UTR variant - [Sequence Ontology: SO:0001623]
  • NM_001374427.1:c.-8G>A - 5 prime UTR variant - [Sequence Ontology: SO:0001623]
  • NM_001374425.1:c.425G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_002617.4:c.425G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_153818.2:c.425G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NR_164636.1:n.544G>A - non-coding transcript variant - [Sequence Ontology: SO:0001619]

Condition(s)

Name:
Zellweger spectrum disorders (ZS)
Synonyms:
Zellweger syndrome; Zellweger Spectrum Disorder; Zellweger Spectrum
Identifiers:
MONDO: MONDO:0019609; MedGen: C0043459; Orphanet: 912

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV002094133Natera, Inc.
no assertion criteria provided
Likely benign
(Oct 28, 2019)
germlineclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Natera, Inc., SCV002094133.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024