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NM_014363.6(SACS):c.3309dup (p.Val1104fs) AND not provided

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
Jan 11, 2022
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001822154.4

Allele description [Variation Report for NM_014363.6(SACS):c.3309dup (p.Val1104fs)]

NM_014363.6(SACS):c.3309dup (p.Val1104fs)

Gene:
SACS:sacsin molecular chaperone [Gene - OMIM - HGNC]
Variant type:
Duplication
Cytogenetic location:
13q12.12
Genomic location:
Preferred name:
NM_014363.6(SACS):c.3309dup (p.Val1104fs)
HGVS:
  • NC_000013.11:g.23340568dup
  • NG_012342.1:g.98136dup
  • NM_001278055.2:c.2868dup
  • NM_014363.6:c.3309dupMANE SELECT
  • NP_001264984.1:p.Val957fs
  • NP_055178.3:p.Val1104fs
  • NC_000013.10:g.23914705_23914706insA
  • NC_000013.10:g.23914707dup
  • NM_014363.5:c.3309dup
Protein change:
V1104fs
Links:
dbSNP: rs2137636629
NCBI 1000 Genomes Browser:
rs2137636629
Molecular consequence:
  • NM_001278055.2:c.2868dup - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_014363.6:c.3309dup - frameshift variant - [Sequence Ontology: SO:0001589]

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV002064493Genetic Services Laboratory, University of Chicago
criteria provided, single submitter

(ACMG Guidelines, 2015)		Likely pathogenic
(Jan 11, 2022) 		germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee..

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From Genetic Services Laboratory, University of Chicago, SCV002064493.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024