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NM_006005.3(WFS1):c.2563_2565delinsCCG (p.Ser855Pro) AND not specified

Germline classification:
Likely benign (1 submission)
Last evaluated:
Jul 18, 2020
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001816793.4

Allele description [Variation Report for NM_006005.3(WFS1):c.2563_2565delinsCCG (p.Ser855Pro)]

NM_006005.3(WFS1):c.2563_2565delinsCCG (p.Ser855Pro)

Gene:
WFS1:wolframin ER transmembrane glycoprotein [Gene - OMIM - HGNC]
Variant type:
Indel
Cytogenetic location:
4p16.1
Genomic location:
Preferred name:
NM_006005.3(WFS1):c.2563_2565delinsCCG (p.Ser855Pro)
HGVS:
  • NC_000004.12:g.6302358_6302360delinsCCG
  • NG_011700.1:g.37509_37511delinsCCG
  • NM_001145853.1:c.2563_2565delinsCCG
  • NM_006005.3:c.2563_2565delinsCCGMANE SELECT
  • NP_001139325.1:p.Ser855Pro
  • NP_005996.2:p.Ser855Pro
  • LRG_1417t1:c.2563_2565delinsCCG
  • LRG_1417:g.37509_37511delinsCCG
  • LRG_1417p1:p.Ser855Pro
  • NC_000004.11:g.6304085_6304087delinsCCG
Protein change:
S855P
Links:
dbSNP: rs1560422132
NCBI 1000 Genomes Browser:
rs1560422132
Molecular consequence:
  • NM_001145853.1:c.2563_2565delinsCCG - missense variant - [Sequence Ontology: SO:0001583]
  • NM_006005.3:c.2563_2565delinsCCG - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:
AllHighlyPenetrant
Identifiers:
MedGen: CN169374

Recent activity

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  • RecName: Full=Fibroblast growth factor receptor 1; Short=FGFR-1; AltName: Full=B...
    RecName: Full=Fibroblast growth factor receptor 1; Short=FGFR-1; AltName: Full=Basic fibroblast growth factor receptor 1; Short=BFGFR; Short=bFGF-R-1; AltName: Full=Fms-like tyrosine kinase 2; Short=FLT-2; AltName: Full=N-sam; AltName: Full=Proto-oncogene c-Fgr; AltName: CD_antigen=CD331; Flags: Precursor
    gi|120046|sp|P11362.3|FGFR1_HUMAN
    Protein

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV002067519Genetic Services Laboratory, University of Chicago
criteria provided, single submitter

(ACMG Guidelines, 2015)		Likely benign
(Jul 18, 2020) 		germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenonot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee..

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From Genetic Services Laboratory, University of Chicago, SCV002067519.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenonot providednot providednot providednot providednot providednot providednot provided

Last Updated: Apr 9, 2023