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NM_032578.4(MYPN):c.1134C>T (p.Ile378=) AND not provided

Germline classification:
Benign/Likely benign (2 submissions)
Last evaluated:
Feb 1, 2024
Review status:
2 stars out of maximum of 4 stars
criteria provided, multiple submitters, no conflicts
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001812098.20

Allele description

NM_032578.4(MYPN):c.1134C>T (p.Ile378=)

Gene:
MYPN:myopalladin [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
10q21.3
Genomic location:
Preferred name:
NM_032578.4(MYPN):c.1134C>T (p.Ile378=)
Other names:
p.I378I:ATC>ATT
HGVS:
  • NC_000010.11:g.68148356C>T
  • NG_032118.1:g.47240C>T
  • NM_001256267.2:c.1134C>T
  • NM_001256268.2:c.252C>T
  • NM_032578.4:c.1134C>TMANE SELECT
  • NP_001243196.1:p.Ile378=
  • NP_001243196.1:p.Ile378=
  • NP_001243197.1:p.Ile84=
  • NP_001243197.1:p.Ile84=
  • NP_115967.2:p.Ile378=
  • NP_115967.2:p.Ile378=
  • LRG_410t1:c.1134C>T
  • LRG_410:g.47240C>T
  • LRG_410p1:p.Ile378=
  • NC_000010.10:g.69908113C>T
  • NM_001256267.1:c.1134C>T
  • NM_001256268.1:c.252C>T
  • NM_032578.2:c.1134C>T
  • NM_032578.3:c.1134C>T
  • NR_045662.4:n.671C>T
  • NR_045663.4:n.1371C>T
  • p.Ile378Ile
Links:
dbSNP: rs145701607
NCBI 1000 Genomes Browser:
rs145701607
Molecular consequence:
  • NR_045662.4:n.671C>T - non-coding transcript variant - [Sequence Ontology: SO:0001619]
  • NR_045663.4:n.1371C>T - non-coding transcript variant - [Sequence Ontology: SO:0001619]
  • NM_001256267.2:c.1134C>T - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_001256268.2:c.252C>T - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_032578.4:c.1134C>T - synonymous variant - [Sequence Ontology: SO:0001819]
Observations:
14

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001474363ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories
criteria provided, single submitter

(ARUP Molecular Germline Variant Investigation Process 2024)
Benign
(Aug 23, 2023)
germlineclinical testing

Citation Link,

SCV002821512CeGaT Center for Human Genetics Tuebingen
criteria provided, single submitter

(CeGaT Center For Human Genetics Tuebingen Variant Classification Criteria Version 2)
Likely benign
(Feb 1, 2024)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyes14not providednot providednot providednot providedclinical testing
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories, SCV001474363.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

From CeGaT Center for Human Genetics Tuebingen, SCV002821512.8

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided14not providednot providedclinical testingnot provided

Description

MYPN: BP4, BS2

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot provided14not providednot providednot provided

Last Updated: May 7, 2024