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NM_001048174.2(MUTYH):c.439G>T (p.Ala147Ser) AND not provided

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Jun 6, 2021
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001800770.2

Allele description [Variation Report for NM_001048174.2(MUTYH):c.439G>T (p.Ala147Ser)]

NM_001048174.2(MUTYH):c.439G>T (p.Ala147Ser)

Gene:
MUTYH:mutY DNA glycosylase [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
1p34.1
Genomic location:
Preferred name:
NM_001048174.2(MUTYH):c.439G>T (p.Ala147Ser)
HGVS:
  • NC_000001.11:g.45332816C>A
  • NG_008189.1:g.12655G>T
  • NM_001048171.2:c.439G>T
  • NM_001048172.2:c.442G>T
  • NM_001048173.2:c.439G>T
  • NM_001048174.2:c.439G>TMANE SELECT
  • NM_001128425.2:c.523G>T
  • NM_001293190.2:c.484G>T
  • NM_001293191.2:c.472G>T
  • NM_001293192.2:c.163G>T
  • NM_001293195.2:c.439G>T
  • NM_001293196.2:c.163G>T
  • NM_001350650.2:c.94G>T
  • NM_001350651.2:c.94G>T
  • NM_012222.3:c.514G>T
  • NP_001041636.2:p.Ala147Ser
  • NP_001041637.1:p.Ala148Ser
  • NP_001041638.1:p.Ala147Ser
  • NP_001041639.1:p.Ala147Ser
  • NP_001121897.1:p.Ala175Ser
  • NP_001121897.1:p.Ala175Ser
  • NP_001280119.1:p.Ala162Ser
  • NP_001280120.1:p.Ala158Ser
  • NP_001280121.1:p.Ala55Ser
  • NP_001280124.1:p.Ala147Ser
  • NP_001280125.1:p.Ala55Ser
  • NP_001337579.1:p.Ala32Ser
  • NP_001337580.1:p.Ala32Ser
  • NP_036354.1:p.Ala172Ser
  • LRG_220t1:c.523G>T
  • LRG_220:g.12655G>T
  • LRG_220p1:p.Ala175Ser
  • NC_000001.10:g.45798488C>A
  • NM_001128425.1:c.523G>T
  • NR_146882.2:n.667G>T
  • NR_146883.2:n.516G>T
Protein change:
A147S
Links:
dbSNP: rs770478980
NCBI 1000 Genomes Browser:
rs770478980
Molecular consequence:
  • NM_001048171.2:c.439G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001048172.2:c.442G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001048173.2:c.439G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001048174.2:c.439G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001128425.2:c.523G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001293190.2:c.484G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001293191.2:c.472G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001293192.2:c.163G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001293195.2:c.439G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001293196.2:c.163G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001350650.2:c.94G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001350651.2:c.94G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_012222.3:c.514G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NR_146882.2:n.667G>T - non-coding transcript variant - [Sequence Ontology: SO:0001619]
  • NR_146883.2:n.516G>T - non-coding transcript variant - [Sequence Ontology: SO:0001619]

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV002047245Quest Diagnostics Nichols Institute San Juan Capistrano
criteria provided, single submitter

(Quest Diagnostics criteria)
Uncertain significance
(Jun 6, 2021)
unknownclinical testing

PubMed (2)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownunknownnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Breast Cancer Risk Genes - Association Analysis in More than 113,000 Women.

Breast Cancer Association Consortium., Dorling L, Carvalho S, Allen J, González-Neira A, Luccarini C, Wahlström C, Pooley KA, Parsons MT, Fortuno C, Wang Q, Bolla MK, Dennis J, Keeman R, Alonso MR, Álvarez N, Herraez B, Fernandez V, Núñez-Torres R, Osorio A, Valcich J, Li M, et al.

N Engl J Med. 2021 Feb 4;384(5):428-439. doi: 10.1056/NEJMoa1913948. Epub 2021 Jan 20.

PubMed [citation]
PMID:
33471991
PMCID:
PMC7611105

A Standardized DNA Variant Scoring System for Pathogenicity Assessments in Mendelian Disorders.

Karbassi I, Maston GA, Love A, DiVincenzo C, Braastad CD, Elzinga CD, Bright AR, Previte D, Zhang K, Rowland CM, McCarthy M, Lapierre JL, Dubois F, Medeiros KA, Batish SD, Jones J, Liaquat K, Hoffman CA, Jaremko M, Wang Z, Sun W, Buller-Burckle A, et al.

Hum Mutat. 2016 Jan;37(1):127-34. doi: 10.1002/humu.22918. Epub 2015 Oct 29.

PubMed [citation]
PMID:
26467025
PMCID:
PMC4737317

Details of each submission

From Quest Diagnostics Nichols Institute San Juan Capistrano, SCV002047245.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (2)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Oct 26, 2024