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NM_173477.5(USH1G):c.711del (p.Arg238fs) AND Usher syndrome type 1G

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Mar 26, 2020
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001785119.4

Allele description [Variation Report for NM_173477.5(USH1G):c.711del (p.Arg238fs)]

NM_173477.5(USH1G):c.711del (p.Arg238fs)

Gene:
USH1G:USH1 protein network component sans [Gene - OMIM - HGNC]
Variant type:
Deletion
Cytogenetic location:
17q25.1
Genomic location:
Preferred name:
NM_173477.5(USH1G):c.711del (p.Arg238fs)
HGVS:
  • NC_000017.11:g.74920127del
  • NG_007882.2:g.8139del
  • NG_033062.2:g.853del
  • NM_001282489.3:c.402del
  • NM_173477.5:c.711delMANE SELECT
  • NP_001269418.1:p.Arg135fs
  • NP_775748.2:p.Arg238fs
  • LRG_1416t1:c.711del
  • LRG_1416:g.8139del
  • LRG_1416p1:p.Arg238fs
  • NC_000017.10:g.72916222del
  • NM_173477.2:c.711del
Protein change:
R135fs
Links:
dbSNP: rs2144754031
NCBI 1000 Genomes Browser:
rs2144754031
Molecular consequence:
  • NM_001282489.3:c.402del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_173477.5:c.711del - frameshift variant - [Sequence Ontology: SO:0001589]

Condition(s)

Name:
Usher syndrome type 1G
Synonyms:
USHER SYNDROME, TYPE IG, MILD
Identifiers:
MONDO: MONDO:0011748; MedGen: C1847089; Orphanet: 231169; Orphanet: 886; OMIM: 606943

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV002020833Revvity Omics, Revvity
criteria provided, single submitter

(ACMG Guidelines, 2015)
Pathogenic
(Mar 26, 2020)
germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee..

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From Revvity Omics, Revvity, SCV002020833.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Mar 16, 2024