NM_005477.3(HCN4):c.2878CCACCC[1] (p.Pro962_Pro963del) AND not provided

Germline classification:: Uncertain significance (1 submission)
Last evaluated:: Sep 10, 2019
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV001760282.2

Allele description [Variation Report for NM_005477.3(HCN4):c.2878CCACCC[1] (p.Pro962_Pro963del)]

NM_005477.3(HCN4):c.2878CCACCC[1] (p.Pro962_Pro963del)

Gene:

HCN4:hyperpolarization activated cyclic nucleotide gated potassium channel 4 [Gene - OMIM - HGNC]

Variant type:

Microsatellite

Cytogenetic location:

15q24.1

Genomic location:

Preferred name:

NM_005477.3(HCN4):c.2878CCACCC[1] (p.Pro962_Pro963del)

HGVS:

NC_000015.10:g.73323204GGGTGG[1]
NG_009063.1:g.51050CCACCC[1]
NM_005477.3:c.2878CCACCC[1]MANE SELECT
NP_005468.1:p.Pro962_Pro963del
NC_000015.9:g.73615545GGGTGG[1]
NC_000015.9:g.73615545_73615550del
NM_005477.2:c.2884_2889del
NM_005477.3:c.2884_2889delMANE SELECT

Links:

dbSNP: rs750207209

NCBI 1000 Genomes Browser:

rs750207209

Molecular consequence:

NM_005477.3:c.2878CCACCC[1] - inframe_deletion - [Sequence Ontology: SO:0001822]

Condition(s)

Synonyms:: none provided
Identifiers:: MedGen: C3661900

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Enterococcus durans strain CAU6680 16S ribosomal RNA gene, partial sequence
Enterococcus durans strain CAU6680 16S ribosomal RNA gene, partial sequence
gi|1214359991|gb|MF425531.1|

Nucleotide

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV001998984	GeneDx	criteria provided, single submitter (GeneDx Variant Classification Process June 2021)	Uncertain significance (Sep 10, 2019)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV001998984

GeneDx

criteria provided, single submitter

(GeneDx Variant Classification Process June 2021)

Uncertain significance
(Sep 10, 2019)

germline

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	yes	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From GeneDx, SCV001998984.2

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

Description

Has not been previously published as pathogenic or benign to our knowledge; Not observed at a significant frequency in large population cohorts (Lek et al., 2016); In silico analysis, which includes protein predictors and evolutionary conservation, supports that this variant does not alter protein structure/function

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	yes	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Sep 29, 2024

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