ClinVar

NM_007194.4(CHEK2):c.115T>C (p.Ser39Pro)

Gene:

CHEK2:checkpoint kinase 2 [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

22q12.1

Genomic location:

• Chr22: 28734607 (on Assembly GRCh38)
• Chr22: 29130595 (on Assembly GRCh37)

Preferred name:

NM_007194.4(CHEK2):c.115T>C (p.Ser39Pro)

HGVS:

• NC_000022.11:g.28734607A>G
• NG_008150.2:g.12260T>C
• NM_001005735.2:c.115T>C
• NM_001257387.2:c.-663T>C
• NM_001349956.2:c.115T>C
• NM_007194.4:c.115T>CMANE SELECT
• NM_145862.2:c.115T>C
• NP_001005735.1:p.Ser39Pro
• NP_001336885.1:p.Ser39Pro
• NP_009125.1:p.Ser39Pro
• NP_665861.1:p.Ser39Pro
• LRG_302t1:c.115T>C
• LRG_302:g.12260T>C
• LRG_302p1:p.Ser39Pro
• NC_000022.10:g.29130595A>G
• NG_008150.1:g.12228T>C
• NM_007194.3:c.115T>C

This HGVS expression did not pass validation

Protein change:

S39P

Links:

dbSNP: rs1060502696

NCBI 1000 Genomes Browser:

rs1060502696

Molecular consequence:

• NM_001257387.2:c.-663T>C - 5 prime UTR variant - [Sequence Ontology: SO:0001623]
• NM_001005735.2:c.115T>C - missense variant - [Sequence Ontology: SO:0001583]
• NM_001349956.2:c.115T>C - missense variant - [Sequence Ontology: SO:0001583]
• NM_007194.4:c.115T>C - missense variant - [Sequence Ontology: SO:0001583]
• NM_145862.2:c.115T>C - missense variant - [Sequence Ontology: SO:0001583]