NM_000251.3(MSH2):c.212-2A>G AND not provided

Germline classification:: Pathogenic (3 submissions)
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV001699196.5

Allele description [Variation Report for NM_000251.3(MSH2):c.212-2A>G]

NM_000251.3(MSH2):c.212-2A>G

Gene:

MSH2:mutS homolog 2 [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

2p21

Genomic location:

Preferred name:

NM_000251.3(MSH2):c.212-2A>G

HGVS:

NC_000002.12:g.47408399A>G
NG_007110.2:g.10276A>G
NM_000251.3:c.212-2A>GMANE SELECT
NM_001258281.1:c.14-2A>G
NM_001406631.1:c.212-2A>G
NM_001406632.1:c.212-2A>G
NM_001406633.1:c.212-2A>G
NM_001406634.1:c.212-2A>G
NM_001406635.1:c.212-2A>G
NM_001406636.1:c.212-2A>G
NM_001406637.1:c.212-2A>G
NM_001406638.1:c.212-2A>G
NM_001406639.1:c.212-2A>G
NM_001406640.1:c.212-2A>G
NM_001406641.1:c.212-2A>G
NM_001406642.1:c.212-2A>G
NM_001406643.1:c.212-2A>G
NM_001406644.1:c.212-2A>G
NM_001406645.1:c.212-2A>G
NM_001406646.1:c.212-2A>G
NM_001406647.1:c.212-2A>G
NM_001406648.1:c.212-2A>G
NM_001406649.1:c.212-2A>G
NM_001406650.1:c.212-2A>G
NM_001406651.1:c.212-2A>G
NM_001406652.1:c.212-2A>G
NM_001406653.1:c.212-62A>G
NM_001406654.1:c.-129-82A>G
NM_001406655.1:c.212-2A>G
NM_001406656.1:c.-784-2A>G
NM_001406657.1:c.212-2A>G
NM_001406658.1:c.-1107-2A>G
NM_001406659.1:c.-1257-2A>G
NM_001406660.1:c.-1454-2A>G
NM_001406661.1:c.-1409-2A>G
NM_001406662.1:c.-1326-2A>G
NM_001406666.1:c.212-2A>G
NM_001406669.1:c.-1257-2A>G
NM_001406672.1:c.212-2A>G
NM_001406674.1:c.212-2A>G
LRG_218t1:c.212-2A>G
LRG_218:g.10276A>G
NC_000002.11:g.47635538A>G
NM_000251.1:c.212-2A>G
NM_000251.2:c.212-2A>G

Links:

dbSNP: rs267607917

NCBI 1000 Genomes Browser:

rs267607917

Molecular consequence:

NM_001406653.1:c.212-62A>G - intron variant - [Sequence Ontology: SO:0001627]
NM_001406654.1:c.-129-82A>G - intron variant - [Sequence Ontology: SO:0001627]
NM_000251.3:c.212-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001258281.1:c.14-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406631.1:c.212-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406632.1:c.212-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406633.1:c.212-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406634.1:c.212-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406635.1:c.212-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406636.1:c.212-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406637.1:c.212-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406638.1:c.212-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406639.1:c.212-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406640.1:c.212-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406641.1:c.212-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406642.1:c.212-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406643.1:c.212-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406644.1:c.212-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406645.1:c.212-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406646.1:c.212-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406647.1:c.212-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406648.1:c.212-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406649.1:c.212-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406650.1:c.212-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406651.1:c.212-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406652.1:c.212-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406655.1:c.212-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406656.1:c.-784-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406657.1:c.212-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406658.1:c.-1107-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406659.1:c.-1257-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406660.1:c.-1454-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406661.1:c.-1409-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406662.1:c.-1326-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406666.1:c.212-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406669.1:c.-1257-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406672.1:c.212-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]
NM_001406674.1:c.212-2A>G - splice acceptor variant - [Sequence Ontology: SO:0001574]

Condition(s)

Synonyms:: none provided
Identifiers:: MedGen: C3661900

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method
SCV001924222	Clinical Genetics, Academic Medical Center - VKGL Data-share Consensus See additional submitters Diagnostic Laboratory, Department of Genetics, University Medical Center Groningen	no assertion criteria provided	Pathogenic	germline	clinical testing
SCV001954468	Joint Genome Diagnostic Labs from Nijmegen and Maastricht, Radboudumc and MUMC+ - VKGL Data-share Consensus See additional submitters Diagnostic Laboratory, Department of Genetics, University Medical Center Groningen	no assertion criteria provided	Pathogenic	germline	clinical testing
SCV001965368	Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center - VKGL Data-share Consensus See additional submitters Diagnostic Laboratory, Department of Genetics, University Medical Center Groningen	no assertion criteria provided	Pathogenic	germline	clinical testing

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV001924222

Clinical Genetics, Academic Medical Center - VKGL Data-share Consensus

See additional submitters

no assertion criteria provided

Pathogenic

germline

clinical testing

SCV001954468

Joint Genome Diagnostic Labs from Nijmegen and Maastricht, Radboudumc and MUMC+ - VKGL Data-share Consensus

See additional submitters

no assertion criteria provided

Pathogenic

germline

clinical testing

SCV001965368

Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center - VKGL Data-share Consensus

See additional submitters

no assertion criteria provided

Pathogenic

germline

clinical testing

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	yes	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From Clinical Genetics, Academic Medical Center - VKGL Data-share Consensus, SCV001924222.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	yes	not provided	not provided	not provided		not provided	not provided	not provided	not provided

From Joint Genome Diagnostic Labs from Nijmegen and Maastricht, Radboudumc and MUMC+ - VKGL Data-share Consensus, SCV001954468.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	yes	not provided	not provided	not provided		not provided	not provided	not provided	not provided

From Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center - VKGL Data-share Consensus, SCV001965368.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	yes	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Oct 26, 2024

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