NM_016284.5(CNOT1):c.6454-163C>G AND not provided

Germline classification:: Benign (1 submission)
Last evaluated:: May 11, 2021
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV001696676.1

Allele description [Variation Report for NM_016284.5(CNOT1):c.6454-163C>G]

NM_016284.5(CNOT1):c.6454-163C>G

Gene:

CNOT1:CCR4-NOT transcription complex subunit 1 [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

16q21

Genomic location:

Preferred name:

NM_016284.5(CNOT1):c.6454-163C>G

HGVS:

NC_000016.10:g.58526301G>C
NM_001265612.2:c.6439-163C>G
NM_016284.5:c.6454-163C>GMANE SELECT
NC_000016.9:g.58560205G>C

Links:

dbSNP: rs28468502

NCBI 1000 Genomes Browser:

rs28468502

Molecular consequence:

NM_001265612.2:c.6439-163C>G - intron variant - [Sequence Ontology: SO:0001627]
NM_016284.5:c.6454-163C>G - intron variant - [Sequence Ontology: SO:0001627]

Condition(s)

Synonyms:: none provided
Identifiers:: MedGen: C3661900

Recent activity

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Escherichia coli strain CVM N17EC0374, whole genome shotgun sequencing project
Escherichia coli strain CVM N17EC0374, whole genome shotgun sequencing project
gi|1516352022|gb|RNQZ00000000.1|RNQ 0000

Nucleotide
Escherichia coli strain CVM N17EC1170, whole genome shotgun sequencing project
Escherichia coli strain CVM N17EC1170, whole genome shotgun sequencing project
gi|1517386560|gb|RNXA00000000.1|RNX 0000

Nucleotide
Escherichia coli strain CVM N17EC0638, whole genome shotgun sequencing project
Escherichia coli strain CVM N17EC0638, whole genome shotgun sequencing project
gi|1516405499|gb|RNSW00000000.1|RNS 0000

Nucleotide
Escherichia coli strain CVM N17EC0837, whole genome shotgun sequencing project
Escherichia coli strain CVM N17EC0837, whole genome shotgun sequencing project
gi|1517386628|gb|RODE00000000.1|ROD 0000

Nucleotide
Escherichia coli strain CVM N17EC1026, whole genome shotgun sequencing project
Escherichia coli strain CVM N17EC1026, whole genome shotgun sequencing project
gi|1517386622|gb|ROCV00000000.1|ROC 0000

Nucleotide

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV001916391	GeneDx	criteria provided, single submitter (GeneDx Variant Classification Process June 2021)	Benign (May 11, 2021)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV001916391

GeneDx

criteria provided, single submitter

(GeneDx Variant Classification Process June 2021)

Benign
(May 11, 2021)

germline

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	yes	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From GeneDx, SCV001916391.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	yes	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Dec 24, 2023

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