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NM_000251.3(MSH2):c.942+28_942+29del AND not provided

Germline classification:
Benign (1 submission)
Last evaluated:
Aug 9, 2019
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001683345.8

Allele description [Variation Report for NM_000251.3(MSH2):c.942+28_942+29del]

NM_000251.3(MSH2):c.942+28_942+29del

Gene:
MSH2:mutS homolog 2 [Gene - OMIM - HGNC]
Variant type:
Deletion
Cytogenetic location:
2p21
Genomic location:
Preferred name:
NM_000251.3(MSH2):c.942+28_942+29del
HGVS:
  • NC_000002.11:g.47641560_47641561del
  • NC_000002.12:g.47414446_47414447del
  • NG_007110.2:g.16323_16324del
  • NM_000251.2:c.942+10_942+11delAA
  • NM_000251.3:c.942+28_942+29delMANE SELECT
  • NM_001258281.1:c.744+28_744+29del
  • LRG_218t1:c.942+28_942+29del
  • LRG_218:g.16323_16324del
  • NC_000002.11:g.47641560_47641561del
  • NC_000002.11:g.47641560_47641561delAA
  • NC_000002.11:g.47641585_47641586del
  • NM_000251.2:c.942+10_942+11delAA
  • NM_000251.2:c.942+28_942+29del
  • NM_000251.2:c.942+28_942+29delAA
  • NM_000251.2:c.942+3_c.942+4delAA
  • NM_000251.3:c.942+28_942+29delAAMANE SELECT
Links:
dbSNP: rs11309117
NCBI 1000 Genomes Browser:
rs11309117
Molecular consequence:
  • NM_000251.3:c.942+28_942+29del - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001258281.1:c.744+28_744+29del - intron variant - [Sequence Ontology: SO:0001627]

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV001899365GeneDx
criteria provided, single submitter

(GeneDx Variant Classification Process June 2021)		Benign
(Aug 9, 2019) 		germlineclinical testing

Citation Link

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From GeneDx, SCV001899365.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Nov 10, 2024