NM_144573.4(NEXN):c.299-14del AND not provided

Germline classification:: Benign (1 submission)
Last evaluated:: Dec 1, 2015
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV001668169.2

Allele description [Variation Report for NM_144573.4(NEXN):c.299-14del]

NM_144573.4(NEXN):c.299-14del

Genes:

LOC126805765:BRD4-independent group 4 enhancer GRCh37_chr1:78383688-78384887 [Gene]
NEXN:nexilin F-actin binding protein [Gene - OMIM - HGNC]

Variant type:

Deletion

Cytogenetic location:

1p31.1

Genomic location:

Preferred name:

NM_144573.4(NEXN):c.299-14del

HGVS:

NC_000001.11:g.77918111del
NG_016625.1:g.34597del
NM_001172309.2:c.107-14del
NM_144573.4:c.299-14delMANE SELECT
LRG_442:g.34597del
NC_000001.10:g.78383796del
NC_000001.10:g.78383796delT
NM_144573.3:c.299-14delT
c.299-14delT

Links:

dbSNP: rs397517855

NCBI 1000 Genomes Browser:

rs397517855

Molecular consequence:

NM_001172309.2:c.107-14del - intron variant - [Sequence Ontology: SO:0001627]
NM_144573.4:c.299-14del - intron variant - [Sequence Ontology: SO:0001627]

Condition(s)

Synonyms:: none provided
Identifiers:: MedGen: CN517202

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV001886299	GeneDx	criteria provided, single submitter (GeneDx Variant Classification Process June 2021)	Benign (Dec 1, 2015)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV001886299

GeneDx

criteria provided, single submitter

(GeneDx Variant Classification Process June 2021)

Benign
(Dec 1, 2015)

germline

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	yes	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From GeneDx, SCV001886299.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	yes	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Mar 26, 2023

ClinVar

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