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NM_005609.4(PYGM):c.1A>G (p.Met1Val) AND not provided

Germline classification:
Pathogenic (2 submissions)
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001579810.2

Allele description [Variation Report for NM_005609.4(PYGM):c.1A>G (p.Met1Val)]

NM_005609.4(PYGM):c.1A>G (p.Met1Val)

Gene:
PYGM:glycogen phosphorylase, muscle associated [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
11q13.1
Genomic location:
Preferred name:
NM_005609.4(PYGM):c.1A>G (p.Met1Val)
HGVS:
  • NC_000011.10:g.64759898T>C
  • NG_013018.1:g.5818A>G
  • NM_001164716.1:c.1A>G
  • NM_005609.4:c.1A>GMANE SELECT
  • NP_001158188.1:p.Met1Val
  • NP_005600.1:p.Met1Val
  • NC_000011.9:g.64527370T>C
  • NM_005609.2:c.1A>G
Protein change:
M1V; MET1VAL
Links:
OMIM: 608455.0012; dbSNP: rs267606993
NCBI 1000 Genomes Browser:
rs267606993
Molecular consequence:
  • NM_001164716.1:c.1A>G - initiator_codon_variant - [Sequence Ontology: SO:0001582]
  • NM_005609.4:c.1A>G - initiator_codon_variant - [Sequence Ontology: SO:0001582]
  • NM_001164716.1:c.1A>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_005609.4:c.1A>G - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001808586Genome Diagnostics Laboratory, Amsterdam University Medical Center - VKGL Data-share Consensus
no assertion criteria provided
Pathogenicgermlineclinical testing

SCV001930380Genome Diagnostics Laboratory, University Medical Center Utrecht - VKGL Data-share Consensus

See additional submitters

no assertion criteria provided
Pathogenicgermlineclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Genome Diagnostics Laboratory, Amsterdam University Medical Center - VKGL Data-share Consensus, SCV001808586.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

From Genome Diagnostics Laboratory, University Medical Center Utrecht - VKGL Data-share Consensus, SCV001930380.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024