NM_001044.5(SLC6A3):c.1156+299T>C AND not provided

Germline classification:: Likely benign (1 submission)
Last evaluated:: Aug 26, 2018
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV001574711.3

Allele description [Variation Report for NM_001044.5(SLC6A3):c.1156+299T>C]

NM_001044.5(SLC6A3):c.1156+299T>C

Gene:

SLC6A3:solute carrier family 6 member 3 [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

5p15.33

Genomic location:

Preferred name:

NM_001044.5(SLC6A3):c.1156+299T>C

HGVS:

NC_000005.10:g.1414392A>G
NG_015885.1:g.36037T>C
NM_001044.5:c.1156+299T>CMANE SELECT
NC_000005.9:g.1414507A>G

Links:

dbSNP: rs111302651

NCBI 1000 Genomes Browser:

rs111302651

Molecular consequence:

NM_001044.5:c.1156+299T>C - intron variant - [Sequence Ontology: SO:0001627]

Condition(s)

Synonyms:: none provided
Identifiers:: MedGen: C3661900

Recent activity

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anaphase-promoting complex subunit 2 isoform X1 [Homo sapiens]
anaphase-promoting complex subunit 2 isoform X1 [Homo sapiens]
gi|2462624384|ref|XP_054218795.1|

Protein
Homo sapiens HECT and RLD domain containing E3 ubiquitin protein ligase 4 (HERC4...
Homo sapiens HECT and RLD domain containing E3 ubiquitin protein ligase 4 (HERC4), transcript variant 2, mRNA
gi|145386582|ref|NM_015601.3|

Nucleotide

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV001801577	GeneDx	criteria provided, single submitter (GeneDx Variant Classification Process June 2021)	Likely benign (Aug 26, 2018)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV001801577

GeneDx

criteria provided, single submitter

(GeneDx Variant Classification Process June 2021)

Likely benign
(Aug 26, 2018)

germline

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	yes	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From GeneDx, SCV001801577.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	yes	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Dec 24, 2023

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