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NM_003560.4(PLA2G6):c.956C>T (p.Thr319Met) AND Autosomal recessive Parkinson disease 14

Germline classification:
Likely pathogenic (1 submission)
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001542714.2

Allele description [Variation Report for NM_003560.4(PLA2G6):c.956C>T (p.Thr319Met)]

NM_003560.4(PLA2G6):c.956C>T (p.Thr319Met)

Gene:
PLA2G6:phospholipase A2 group VI [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
22q13.1
Genomic location:
Preferred name:
NM_003560.4(PLA2G6):c.956C>T (p.Thr319Met)
HGVS:
  • NC_000022.11:g.38132952G>A
  • NG_007094.3:g.86827C>T
  • NM_001004426.3:c.956C>T
  • NM_001199562.3:c.956C>T
  • NM_001349864.2:c.956C>T
  • NM_001349865.2:c.956C>T
  • NM_001349866.2:c.956C>T
  • NM_001349867.2:c.422C>T
  • NM_001349868.2:c.278C>T
  • NM_001349869.2:c.422C>T
  • NM_003560.4:c.956C>TMANE SELECT
  • NP_001004426.1:p.Thr319Met
  • NP_001186491.1:p.Thr319Met
  • NP_001336793.1:p.Thr319Met
  • NP_001336794.1:p.Thr319Met
  • NP_001336795.1:p.Thr319Met
  • NP_001336796.1:p.Thr141Met
  • NP_001336797.1:p.Thr93Met
  • NP_001336798.1:p.Thr141Met
  • NP_003551.2:p.Thr319Met
  • LRG_1015t1:c.956C>T
  • LRG_1015:g.86827C>T
  • LRG_1015p1:p.Thr319Met
  • NC_000022.10:g.38528959G>A
  • NG_007094.2:g.77739C>T
  • NM_003560.2:c.956C>T
Protein change:
T141M
Links:
dbSNP: rs149653983
NCBI 1000 Genomes Browser:
rs149653983
Molecular consequence:
  • NM_001004426.3:c.956C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001199562.3:c.956C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001349864.2:c.956C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001349865.2:c.956C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001349866.2:c.956C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001349867.2:c.422C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001349868.2:c.278C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001349869.2:c.422C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_003560.4:c.956C>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Autosomal recessive Parkinson disease 14
Synonyms:
DYSTONIA-PARKINSONISM, ADULT-ONSET; Parkinson disease 14
Identifiers:
MONDO: MONDO:0013060; MedGen: C2751842; Orphanet: 199351; OMIM: 612953

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001760491Genomics England Pilot Project, Genomics England
no assertion criteria provided

(ACGS Guidelines, 2016)
Likely pathogenicgermlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Genomics England Pilot Project, Genomics England, SCV001760491.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Oct 26, 2024