U.S. flag

An official website of the United States government

NM_006514.4(SCN10A):c.3178T>G (p.Ser1060Ala) AND not provided

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Mar 30, 2020
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001509211.5

Allele description [Variation Report for NM_006514.4(SCN10A):c.3178T>G (p.Ser1060Ala)]

NM_006514.4(SCN10A):c.3178T>G (p.Ser1060Ala)

Genes:
LOC110121288:VISTA enhancer hs2268 [Gene]
SCN10A:sodium voltage-gated channel alpha subunit 10 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
3p22.2
Genomic location:
Preferred name:
NM_006514.4(SCN10A):c.3178T>G (p.Ser1060Ala)
HGVS:
  • NC_000003.12:g.38725224A>C
  • NG_031891.2:g.73787T>G
  • NG_053903.1:g.3189A>C
  • NM_001293306.2:c.3175T>G
  • NM_001293307.2:c.2884T>G
  • NM_006514.4:c.3178T>GMANE SELECT
  • NP_001280235.2:p.Ser1059Ala
  • NP_001280236.2:p.Ser962Ala
  • NP_006505.4:p.Ser1060Ala
  • NC_000003.11:g.38766715A>C
  • NM_006514.2:c.3178T>G
  • NM_006514.3:c.3178T>G
  • p.Ser1060Ala
Protein change:
S1059A
Links:
dbSNP: rs750655728
NCBI 1000 Genomes Browser:
rs750655728
Molecular consequence:
  • NM_001293306.2:c.3175T>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001293307.2:c.2884T>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_006514.4:c.3178T>G - missense variant - [Sequence Ontology: SO:0001583]
Observations:
1

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV001715808Mayo Clinic Laboratories, Mayo Clinic
criteria provided, single submitter

(ACMG Guidelines, 2015)		Uncertain significance
(Mar 30, 2020) 		germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknown1not providednot providednot providednot providedclinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee..

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From Mayo Clinic Laboratories, Mayo Clinic, SCV001715808.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot provided1not providednot providednot provided

Last Updated: Sep 29, 2024